Pm002704 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm002704 T283455_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.794 0.879
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.688 0.764
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.685 0.771
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.682 0.736
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.682 0.736
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm002704 Myb 59 105
Pm002704 Myb 111 157
Pm002704 Myb 163 208

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

143 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_054570 Acremonium chrysogenum ACRE_054570 N
CFIO01_08071 Colletotrichum fioriniae CFIO01_08071 N
CGGC5_3607 Colletotrichum gloeosporioides CGGC5_3607 N
GLRG_06776 Colletotrichum graminicola GLRG_06776 N
CH063_08900 Colletotrichum higginsianum CH063_08900 N
Cob_05888 Colletotrichum orbiculare Cob_05888 N
CSUB01_01660 Colletotrichum sublineola CSUB01_01660 N
UCREL1_9565 Eutypa lata UCREL1_9565 N
FFUJ_13620 Fusarium fujikuroi FFUJ_13620 N
FGRRES_06382 Fusarium graminearum FGRRES_06382 N
FPSE_05827 Fusarium pseudograminearum FPSE_05827 N
NechaG92421 Fusarium solani NechaG92421 N
GGTG_05245 Gaeumannomyces graminis GGTG_05245 N
MGG_09562 Magnaporthe oryzae MGG_09562 N
MAPG_03623 Magnaporthe poae MAPG_03623 N
MAC_07589 Metarhizium acridum MAC_07589 N
MBR_08228 Metarhizium brunneum MBR_08228 N
MGU_03399 Metarhizium guizhouense MGU_03399 N
MAJ_08773 Metarhizium majus MAJ_08773 N
X797_000968 Metarhizium robertsii X797_000968 N
X797_003516 Metarhizium robertsii X797_003516 N
fgenesh1_pm.sca_3_chr4_2_0000036 Nectria haematococca fgenesh1_pm.sca_3_chr4_2_0000036 N
OCS_00747 Ophiocordyceps sinensis OCS_00747 N
OCS_04593 Ophiocordyceps sinensis OCS_04593 N
PFICI_03549 Pestalotiopsis fici PFICI_03549 N
SAPIO_CDS4519 Scedosporium apiospermum SAPIO_CDS4519 N
TRIATDRAFT_293053 Trichoderma atroviride TRIATDRAFT_293053 N
TRIREDRAFT_60897 Trichoderma reesei TRIREDRAFT_60897 N
TRIVIDRAFT_74205 Trichoderma virens TRIVIDRAFT_74205 N