cassava44767.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava44767.m1 T284299_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB33
M02306_2.00 		Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD		 PBM
Weirauch et al.(2014)
pTH8204 		0.849 0.891
MYB33
M07120_2.00 		Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB33_col_a 		0.849 0.891
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.841 0.891
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.841 0.891
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.841 0.891
ATMYB65
M01076_2.00 		Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD		 PBM
Sullivan et al.(2014)
pTH7084 		0.826 0.870
ATMYB65
M07076_2.00 		Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH		 Dap-seq
OMalley et al.(2016)
MYB65_col200_a 		0.826 0.870
ATMYB65
M07077_2.00 		Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB65_colamp_a 		0.826 0.870
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.791 0.837
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.791 0.837
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.776 0.870
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.776 0.870
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.776 0.870
Q9FR42_TOBAC
M11076_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBAS1_01 		0.768 0.815
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava44767.m1 Myb 39 86
cassava44767.m1 Myb 92 136

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

264 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG011591.1 Alligator sinensis Alligator_sinensis_CCG011591.1 I
Alligator_sinensis_CCG011593.1 Alligator sinensis Alligator_sinensis_CCG011593.1 N
ENSAPLG00000007967 Anas platyrhynchos ENSAPLG00000007967 I
ENSAPLG00000007688 Anas platyrhynchos ENSAPLG00000007688 N
Afo_R003312 Aptenodytes forsteri Afo_R003312 N
Afo_R003314 Aptenodytes forsteri Afo_R003314 I
HES5 Bos taurus ENSBTAG00000002483 I
Brh_R011663 Buceros rhinoceros Brh_R011663 I
HES5 Callithrix jacchus ENSCJAG00000002549 I
Aan_R005911 Calypte anna Aan_R005911 N
Aan_R005913 Calypte anna Aan_R005913 I
HES5 Canis familiaris ENSCAFG00000019421 I
ENSCPOG00000027139 Cavia porcellus ENSCPOG00000027139 I
Cmyd_10015932 Chelonia mydas Cmyd_10015932 N
ENSCSAG00000000715 Chlorocebus sabaeus ENSCSAG00000000715 I
HES5 Erinaceus europaeus ENSEEUG00000008377 I
ENSFALG00000009565 Ficedula albicollis ENSFALG00000009565 N
HES5 Gallus gallus ENSGALG00000001141 I
ENSGALG00000001136 Gallus gallus ENSGALG00000001136 N
Gfo_R009738 Geospiza fortis Gfo_R009738 N
Gfo_R009739 Geospiza fortis Gfo_R009739 N
HES5 Gorilla gorilla ENSGGOG00000010276 I
HES5 Homo sapiens ENSG00000197921 D
ENSMMUG00000014688 Macaca mulatta ENSMMUG00000014688 I
ENSMEUG00000013913 Macropus eugenii ENSMEUG00000013913 I
ENSMEUG00000001942 Macropus eugenii ENSMEUG00000001942 N
ENSMGAG00000001983 Meleagris gallopavo ENSMGAG00000001983 N
ENSMODG00000008220 Monodelphis domestica ENSMODG00000008220 N
HES5 Monodelphis domestica ENSMODG00000008212 I
Hes5 Mus musculus ENSMUSG00000048001 D
HES5 Otolemur garnettii ENSOGAG00000030950 I
ENSOARG00000018071 Ovis aries ENSOARG00000018071 I
HES5 Pan troglodytes ENSPTRG00000024233 I
ENSPANG00000022730 Papio anubis ENSPANG00000022730 I
ENSPSIG00000004046 Pelodiscus sinensis ENSPSIG00000004046 N
ENSPSIG00000014816 Pelodiscus sinensis ENSPSIG00000014816 N
ENSPSIG00000004060 Pelodiscus sinensis ENSPSIG00000004060 N
Pvit_15591 Pogona vitticeps Pvit_15591 N
HES5 Procavia capensis ENSPCAG00000001025 I
Hes5 Rattus norvegicus ENSRNOG00000013850 I
ENSSHAG00000014651 Sarcophilus harrisii ENSSHAG00000014651 N
ENSSHAG00000014397 Sarcophilus harrisii ENSSHAG00000014397 I
ENSTGUG00000016560 Taeniopygia guttata ENSTGUG00000016560 N
ENSTGUG00000002875 Taeniopygia guttata ENSTGUG00000002875 N
HES5 Tursiops truncatus ENSTTRG00000003782 I
Tal_R007853 Tyto alba Tal_R007853 N
Tal_R007854 Tyto alba Tal_R007854 N
Tal_R007855 Tyto alba Tal_R007855 I
hes8 Xenopus tropicalis XB-GENE-5952810 N