e_gw1.120.1.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 e_gw1.120.1.1 T284573_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.727 0.829
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.705 0.771
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.705 0.771
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.692 0.807
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.120.1.1 Myb 17 63
e_gw1.120.1.1 Myb 69 115
e_gw1.120.1.1 Myb 121 166

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.000
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.000
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.000
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.000
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.000
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.000
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.000
Aan_R006276 Calypte anna Aan_R006276 I 0.000
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.000
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.000
bcl11aa Danio rerio ENSDARG00000061352 I 0.000
bcl11ab Danio rerio ENSDARG00000063153 I 0.000
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.000
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.000
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.000
BCL11A Felis catus ENSFCAG00000027154 I 0.000
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.000
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.000
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.000
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.000
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.000
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.000
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.000
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.000
BCL11A Homo sapiens ENSG00000119866 D 0.000
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.000
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.000
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.000
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.000
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.000
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.000
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.000
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.000
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.000
BCL11A Microcebus murinus ENSMICG00000015052 I 0.000
Bcl11a Mus musculus ENSMUSG00000000861 I 0.000
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.000
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.000
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.000
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.000
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.000
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.000
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.000
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.000
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.000
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.000
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.000
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.000
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.000
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.000
BCL11A Sus scrofa ENSSSCG00000008392 I 0.000
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.000
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.000
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.000
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.000
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.000
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.000
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.000
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.000
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.000
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.000