e_gw1.6.395.1 (Monosiga brevicollis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 e_gw1.6.395.1 T284642_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.662 0.693
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.662 0.693
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.6.395.1 Myb 42 88
e_gw1.6.395.1 Myb 94 140
e_gw1.6.395.1 Myb 146 191

Links

Other Myb/SANT family TFs
Other Monosiga brevicollis TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I 0.662
PC-MYB1 Arabidopsis thaliana AT4G32730 D 0.662
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I 0.662
Bo3g171130 Brassica oleracea Bo3g171130 I 0.663
Bo7g115810 Brassica oleracea Bo7g115810 I 0.668
Bra034531 Brassica rapa Bra034531 I 0.663
MDP0000295807 Malus domestica MDP0000295807 I 0.666
29794.m003447 Ricinus communis 29794.m003447 I 0.661
Sakowv30034766m.g Saccoglossus kowalevskii Sakowv30034766m.g I 0.696
TCM_047091 Theobroma cacao TCM_047091 I 0.664