CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1Plus.C_sca_11_chr8_3_00500
(
Nectria haematococca
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_Genewise1Plus.C_sca_11_chr8_3_00500
T284820_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_sca_11_chr8_3_00500
Myb
19
70
RRPWTSTEDSALRTLVAHFGDSRGPEGRWKDIAAGLQGRTAKDCRKRWFHSL
estExt_Genewise1Plus.C_sca_11_chr8_3_00500
Myb
76
121
KGRWTAQEDELLLSAYARLGPAWHDIALLIPGRKDDQCSKRYNDIL
estExt_Genewise1Plus.C_sca_11_chr8_3_00500
Myb
130
173
SDWTAQEDNLLRQGVATLGHRWAAISSRIPGRPPLTCRNRWRTL
Links
Other
Myb/SANT
family TFs
Other
Nectria haematococca
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G25230
Brachypodium distachyon
BRADI1G25230
N
MLOC_67972
Hordeum vulgare
MLOC_67972
N
Pavir.Ba00709
Panicum virgatum
Pavir.Ba00709
N
Pavir.Bb02901
Panicum virgatum
Pavir.Bb02901
N
Si032717m.g
Setaria italica
Si032717m.g
N
Sb02g035870
Sorghum bicolor
Sb02g035870
N
Traes_2AS_C0C74B775
Triticum aestivum
Traes_2AS_C0C74B775
N
Traes_2BS_CC6686C54
Triticum aestivum
Traes_2BS_CC6686C54
N
GRMZM2G163233
Zea mays
GRMZM2G163233
N