CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Bb02901
(
Panicum virgatum
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Pavir.Bb02901
T050702_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Bb02901.1.p
bHLH
54
103
YKSKNLEAERRRRGRLNSNILALRAVVPNITKMSKESTLADAIDHIKKLQ
Links
Other
bHLH
family TFs
Other
Panicum virgatum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si032717m.g
Setaria italica
Si032717m.g
N
0.914
Pavir.Ba00709
Panicum virgatum
Pavir.Ba00709
N
0.914
F775_05044
Aegilops tauschii
F775_05044
N
0.894
MLOC_67972
Hordeum vulgare
MLOC_67972
N
0.894
Traes_2AS_C0C74B775
Triticum aestivum
Traes_2AS_C0C74B775
N
0.894
Traes_2BS_CC6686C54
Triticum aestivum
Traes_2BS_CC6686C54
N
0.894
BRADI1G25230
Brachypodium distachyon
BRADI1G25230
N
0.864
GRMZM2G163233
Zea mays
GRMZM2G163233
N
0.859
Sb02g035870
Sorghum bicolor
Sb02g035870
N
0.859