gw1.1.287.1 (Physcomitrella patens)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.1.287.1 T285055_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB1
M01070_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Sullivan et al.(2014)
pTH7117 		0.780 0.761
OS01G0708000
M02326_2.00 		Oryza sativa
WRMCCTAVNN
NNBTAGGKYW		 PBM
Weirauch et al.(2014)
pTH8716 		0.739 0.783
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.708 0.761
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.705 0.761
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.705 0.761
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.705 0.761
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.705 0.761
AT1G72740
M07033_2.00 		Arabidopsis thaliana
HMNAAACCCTAAWYY
RRWTTAGGGTTTNKD		 Dap-seq
OMalley et al.(2016)
AT1G72740_col_a 		0.703 0.674
AT1G72740
M07034_2.00 		Arabidopsis thaliana
HNWAACCCTAAHYHNNNHNNN
NNNDNNNDRDTTAGGGTTWND		 Dap-seq
OMalley et al.(2016)
AT1G72740_colamp_a 		0.703 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.1.287.1 Myb 5 56

Links

Other Myb/SANT family TFs
Other Physcomitrella patens TFs

211 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BDDG_02685 Blastomyces dermatitidis BDDG_02685 N 0.000
A1O7_00778 Cladophialophora yegresii A1O7_00778 N 0.000
CPC735_025030 Coccidioides posadasii CPC735_025030 N 0.000
GLRG_08121 Colletotrichum graminicola GLRG_08121 N 0.000
CH063_02579 Colletotrichum higginsianum CH063_02579 N 0.000
Cob_01259 Colletotrichum orbiculare Cob_01259 N 0.000
CSUB01_03903 Colletotrichum sublineola CSUB01_03903 N 0.000
PV10_08806 Exophiala mesophila PV10_08806 N 0.000
PV06_03512 Exophiala oligosperma PV06_03512 N 0.000
PV08_05909 Exophiala spinifera PV08_05909 N 0.000
PV05_11590 Exophiala xenobiotica PV05_11590 N 0.000
FGRRES_01428 Fusarium graminearum FGRRES_01428 N 0.000
FPSE_08525 Fusarium pseudograminearum FPSE_08525 N 0.000
MPH_04521 Macrophomina phaseolina MPH_04521 N 0.000
MAM_03998 Metarhizium album MAM_03998 N 0.000
MANI_117353 Metarhizium anisopliae MANI_117353 N 0.000
MBR_02139 Metarhizium brunneum MBR_02139 N 0.000
MGU_04466 Metarhizium guizhouense MGU_04466 N 0.000
MAJ_00529 Metarhizium majus MAJ_00529 N 0.000
X797_000127 Metarhizium robertsii X797_000127 N 0.000
fgenesh1_pg.sca_8_chr1_1_0000361 Nectria haematococca fgenesh1_pg.sca_8_chr1_1_0000361 N 0.000
UCRNP2_8766 Neofusicoccum parvum UCRNP2_8766 N 0.000
PABG_03554 Paracoccidioides brasiliensis PABG_03554 N 0.000
PAAG_00562 Paracoccidioides sp lutzii PAAG_00562 N 0.000
PMAA_067510 Penicillium marneffei PMAA_067510 N 0.000
PFICI_11418 Pestalotiopsis fici PFICI_11418 N 0.000
V499_01463 Pseudogymnoascus pannorum V499_01463 N 0.000
Z518_04390 Rhinocladiella mackenziei Z518_04390 N 0.000
PMAA_067510 Talaromyces marneffei PMAA_067510 N 0.000
VDAG_03951 Verticillium dahliae VDAG_03951 N 0.000