gw1.6.1363.1 (Ostreococcus RCC809)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gw1.6.1363.1 T285125_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.693 0.761
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.681 0.739
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.681 0.739
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.678 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.678 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.678 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.678 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.678 0.783
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.671 0.739
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.6.1363.1 Myb 29 74

Links

Other Myb/SANT family TFs
Other Ostreococcus RCC809 TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18043 Aegilops tauschii F775_18043 I 0.715
F775_23690 Aegilops tauschii F775_23690 I 0.700
F775_26024 Aegilops tauschii F775_26024 I 0.671
F775_27077 Aegilops tauschii F775_27077 I 0.742
AMTR_s00001p00272270 Amborella trichopoda AMTR_s00001p00272270 I 0.681
AMTR_s00044p00072910 Amborella trichopoda AMTR_s00044p00072910 I 0.685
Aquca_002_01329 Aquilegia coerulea Aquca_002_01329 I 0.685
fgenesh2_kg.1__2004__AT1G18330.2 Arabidopsis lyrata fgenesh2_kg.1__2004__AT1G18330.2 I 0.678
RVE2 Arabidopsis lyrata fgenesh2_kg.7__3122__AT5G37260.1 I 0.722
LHY Arabidopsis thaliana AT1G01060 D 0.681
RVE7 Arabidopsis thaliana AT1G18330 D 0.678
RVE7L Arabidopsis thaliana AT3G10113 D 0.678
RVE2 Arabidopsis thaliana AT5G37260 I 0.722
Bostr.5325s0026 Boechera stricta Bostr.5325s0026 I 0.681
Bostr.7128s0434 Boechera stricta Bostr.7128s0434 I 0.688
Bostr.9638s0043 Boechera stricta Bostr.9638s0043 I 0.722
BRADI1G29680 Brachypodium distachyon BRADI1G29680 I 0.700
BRADI3G16515 Brachypodium distachyon BRADI3G16515 I 0.671
BRADI3G51960 Brachypodium distachyon BRADI3G51960 I 0.715
BRADI5G19380 Brachypodium distachyon BRADI5G19380 I 0.742
Bo3g001090 Brassica oleracea Bo3g001090 I 0.667
Bo5g002760 Brassica oleracea Bo5g002760 I 0.681
Bo5g025310 Brassica oleracea Bo5g025310 I 0.694
Bo6g057640 Brassica oleracea Bo6g057640 I 0.722
Bra025914 Brassica rapa Bra025914 I 0.694
Bra033291 Brassica rapa Bra033291 I 0.681
Bra039503 Brassica rapa Bra039503 I 0.722
PK08316.1 Cannabis sativa PK08316.1 D 0.693
PK20866.1 Cannabis sativa PK20866.1 I 0.681
PK28456.1 Cannabis sativa PK28456.1 I 0.700
Cagra.0909s0012 Capsella grandiflora Cagra.0909s0012 I 0.688
Cagra.1968s0051 Capsella grandiflora Cagra.1968s0051 I 0.681
Cagra.25009s0002 Capsella grandiflora Cagra.25009s0002 I 0.722
Carubv10005376m.g Capsella rubella Carubv10005376m.g I 0.722
Carubv10008551m.g Capsella rubella Carubv10008551m.g I 0.681
Carubv10009624m.g Capsella rubella Carubv10009624m.g I 0.688
evm.TU.supercontig_1055.1 Carica papaya evm.TU.supercontig_1055.1 I 0.681
evm.TU.supercontig_7.134 Carica papaya evm.TU.supercontig_7.134 I 0.666
fgeneshCV_pg.C_scaffold_1000277 Chlorella vulgaris fgeneshCV_pg.C_scaffold_1000277 I 0.698
Ca_18030 Cicer arietinum Ca_18030 I 0.682
Cla009284 Citrullus lanatus Cla009284 I 0.669
Cla018914 Citrullus lanatus Cla018914 I 0.690
Ciclev10011554m.g Citrus clementina Ciclev10011554m.g I 0.685
Ciclev10018964m.g Citrus clementina Ciclev10018964m.g I 0.679
Ciclev10020130m.g Citrus clementina Ciclev10020130m.g I 0.700
orange1.1g004262m.g Citrus sinensis orange1.1g004262m.g I 0.679
orange1.1g012625m.g Citrus sinensis orange1.1g012625m.g I 0.685
orange1.1g021851m.g Citrus sinensis orange1.1g021851m.g I 0.700
Genemark1.422_g Coccomyxa subellipsoidea C169 Genemark1.422_g I 0.698
Cucsa.112530 Cucumis sativus Cucsa.112530 I 0.690
Cucsa.278220 Cucumis sativus Cucsa.278220 I 0.669
Cucsa.349800 Cucumis sativus Cucsa.349800 I 0.681
Eucgr.D02651 Eucalyptus grandis Eucgr.D02651 I 0.681
Eucgr.F02906 Eucalyptus grandis Eucgr.F02906 I 0.685
Eucgr.K02302 Eucalyptus grandis Eucgr.K02302 I 0.666
Thhalv10007028m.g Eutrema salsugineum Thhalv10007028m.g I 0.681
Thhalv10008035m.g Eutrema salsugineum Thhalv10008035m.g I 0.704
Thhalv10028153m.g Eutrema salsugineum Thhalv10028153m.g I 0.722
gene09296-v1.0-hybrid Fragaria vesca gene09296-v1.0-hybrid I 0.700
GLYMA03G42260 Glycine max GLYMA03G42260 I 0.681
GLYMA07G05410 Glycine max GLYMA07G05410 I 0.681
GLYMA09G29800 Glycine max GLYMA09G29800 I 0.710
GLYMA16G01980 Glycine max GLYMA16G01980 I 0.681
GLYMA16G34340 Glycine max GLYMA16G34340 I 0.708
GLYMA19G45030 Glycine max GLYMA19G45030 I 0.681
Gorai.001G069700 Gossypium raimondii Gorai.001G069700 I 0.698
Gorai.007G113900 Gossypium raimondii Gorai.007G113900 I 0.681
Gorai.008G131800 Gossypium raimondii Gorai.008G131800 I 0.663
Gorai.008G132000 Gossypium raimondii Gorai.008G132000 I 0.681
Gorai.008G293600 Gossypium raimondii Gorai.008G293600 I 0.700
MLOC_14118 Hordeum vulgare MLOC_14118 I 0.671
MLOC_57684 Hordeum vulgare MLOC_57684 I 0.666
MLOC_62877 Hordeum vulgare MLOC_62877 I 0.742
LPERR02G22990 Leersia perrieri LPERR02G22990 I 0.681
LPERR04G18770 Leersia perrieri LPERR04G18770 I 0.764
LPERR06G23620 Leersia perrieri LPERR06G23620 I 0.700
LPERR08G03480 Leersia perrieri LPERR08G03480 I 0.671
Lus10026365.g Linum usitatissimum Lus10026365.g I 0.690
Lus10042292.g Linum usitatissimum Lus10042292.g I 0.690
chr3.CM0208.410.nd Lotus japonicus chr3.CM0208.410.nd I 0.679
MDP0000187927 Malus domestica MDP0000187927 I 0.673
MDP0000193097 Malus domestica MDP0000193097 I 0.685
MDP0000581293 Malus domestica MDP0000581293 I 0.673
MDP0000795432 Malus domestica MDP0000795432 I 0.700
cassava33517.m1 Manihot esculenta cassava33517.m1 I 0.685
cassava35529.valid.m1 Manihot esculenta cassava35529.valid.m1 I 0.685
cassava35530.valid.m1 Manihot esculenta cassava35530.valid.m1 I 0.685
cassava35531.valid.m1 Manihot esculenta cassava35531.valid.m1 I 0.685
cassava36126.valid.m1 Manihot esculenta cassava36126.valid.m1 I 0.681
MTR_5g076960 Medicago truncatula MTR_5g076960 I 0.681
MTR_7g118330 Medicago truncatula MTR_7g118330 I 0.681
estExt_fgenesh2_pg.C_Chr_080053 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_080053 I 0.679
mgf001364m Mimulus guttatus mgf001364m I 0.675
mgf011909m Mimulus guttatus mgf011909m I 0.685
mgf014004m Mimulus guttatus mgf014004m I 0.679
mgf021826m Mimulus guttatus mgf021826m I 0.669
GSMUA_Achr10G06560_001 Musa acuminata GSMUA_Achr10G06560_001 I 0.681
GSMUA_Achr11G01420_001 Musa acuminata GSMUA_Achr11G01420_001 I 0.725
GSMUA_Achr1G06360_001 Musa acuminata GSMUA_Achr1G06360_001 I 0.712
GSMUA_Achr8G13440_001 Musa acuminata GSMUA_Achr8G13440_001 I 0.694
GSMUA_AchrUn_randomG02340_001 Musa acuminata GSMUA_AchrUn_randomG02340_001 I 0.694
GSMUA_AchrUn_randomG03000_001 Musa acuminata GSMUA_AchrUn_randomG03000_001 I 0.697
OBART02G28240 Oryza barthii OBART02G28240 I 0.730
OBART04G23030 Oryza barthii OBART04G23030 I 0.764
OBART06G28140 Oryza barthii OBART06G28140 I 0.700
OB02G35470 Oryza brachyantha OB02G35470 I 0.681
OB04G29880 Oryza brachyantha OB04G29880 I 0.764
OB06G35920 Oryza brachyantha OB06G35920 I 0.700
OB08G13700 Oryza brachyantha OB08G13700 I 0.671
ORGLA02G0242600 Oryza glaberrima ORGLA02G0242600 I 0.730
ORGLA06G0287300 Oryza glaberrima ORGLA06G0287300 I 0.700
ORGLA08G0028700 Oryza glaberrima ORGLA08G0028700 I 0.671
OGLUM02G28780 Oryza glumaepatula OGLUM02G28780 I 0.730
OGLUM04G22920 Oryza glumaepatula OGLUM04G22920 I 0.764
OGLUM06G29530 Oryza glumaepatula OGLUM06G29530 I 0.700
OGLUM08G03510 Oryza glumaepatula OGLUM08G03510 I 0.671
BGIOSGA005828 Oryza indica BGIOSGA005828 I 0.730
BGIOSGA014483 Oryza indica BGIOSGA014483 I 0.764
BGIOSGA020501 Oryza indica BGIOSGA020501 I 0.700
BGIOSGA028019 Oryza indica BGIOSGA028019 I 0.671
OLONG_000103 Oryza longistaminata OLONG_000103 I 0.671
OLONG_003280 Oryza longistaminata OLONG_003280 I 0.730
OLONG_007470 Oryza longistaminata OLONG_007470 I 0.700
OLONG_010266 Oryza longistaminata OLONG_010266 I 0.764
OMERI02G27330 Oryza meridionalis OMERI02G27330 I 0.730
OMERI04G19240 Oryza meridionalis OMERI04G19240 I 0.764
OMERI06G28070 Oryza meridionalis OMERI06G28070 I 0.700
OMERI08G03470 Oryza meridionalis OMERI08G03470 I 0.671
ONIVA04G22180 Oryza nivara ONIVA04G22180 I 0.764
ONIVA06G31120 Oryza nivara ONIVA06G31120 I 0.700
ONIVA08G03410 Oryza nivara ONIVA08G03410 I 0.671
ONIVA09G03730 Oryza nivara ONIVA09G03730 I 0.730
OPUNC02G25920 Oryza punctata OPUNC02G25920 I 0.681
OPUNC04G20560 Oryza punctata OPUNC04G20560 I 0.764
OPUNC06G25680 Oryza punctata OPUNC06G25680 I 0.700
OPUNC08G03280 Oryza punctata OPUNC08G03280 I 0.671
ORUFI02G29720 Oryza rufipogon ORUFI02G29720 I 0.730
ORUFI04G24740 Oryza rufipogon ORUFI04G24740 I 0.764
ORUFI06G30080 Oryza rufipogon ORUFI06G30080 I 0.700
OS02G0685200 Oryza sativa OS02G0685200 I 0.730
OS04G0583900 Oryza sativa OS04G0583900 I 0.764
OS06G0728700 Oryza sativa OS06G0728700 I 0.700
OS08G0157600 Oryza sativa OS08G0157600 D 0.671
OSTLU_5960 Ostreococcus lucimarinus OSTLU_5960 I 0.867
estExt_genewise1.C_Chr_06.00010302 Ostreococcus tauri estExt_genewise1.C_Chr_06.00010302 I 0.802
Pavir.Aa00960 Panicum virgatum Pavir.Aa00960 I 0.697
Pavir.Ab02717 Panicum virgatum Pavir.Ab02717 I 0.715
Pavir.Db00044 Panicum virgatum Pavir.Db00044 I 0.700
Pavir.Fa01905 Panicum virgatum Pavir.Fa01905 I 0.671
Pavir.Gb00859 Panicum virgatum Pavir.Gb00859 I 0.753
Pavir.J00602 Panicum virgatum Pavir.J00602 I 0.666
Pavir.J10427 Panicum virgatum Pavir.J10427 I 0.753
Pavir.J34894 Panicum virgatum Pavir.J34894 I 0.671
PDK_20s1315421g001 Phoenix dactylifera PDK_20s1315421g001 I 0.707
PDK_20s1414244g001 Phoenix dactylifera PDK_20s1414244g001 I 0.671
e_gw1.96.88.1 Physcomitrella patens e_gw1.96.88.1 I 0.694
gw1.325.30.1 Physcomitrella patens gw1.325.30.1 I 0.694
POPTR_0002s18170 Populus trichocarpa POPTR_0002s18170 I 0.681
POPTR_0004s07270 Populus trichocarpa POPTR_0004s07270 I 0.685
POPTR_0015s05430 Populus trichocarpa POPTR_0015s05430 I 0.683
POPTR_0017s01380 Populus trichocarpa POPTR_0017s01380 I 0.685
Pm025253 Prunus mume Pm025253 I 0.700
Pm028731 Prunus mume Pm028731 I 0.681
PRUPE_ppa001765mg Prunus persica PRUPE_ppa001765mg I 0.681
PRUPE_ppa005083mg Prunus persica PRUPE_ppa005083mg I 0.685
PRUPE_ppa006715mg Prunus persica PRUPE_ppa006715mg I 0.700
29677.m000183 Ricinus communis 29677.m000183 I 0.680
30076.m004464 Ricinus communis 30076.m004464 I 0.681
30171.m000418 Ricinus communis 30171.m000418 I 0.685
SapurV1A.0003s0380 Salix purpurea SapurV1A.0003s0380 I 0.681
SapurV1A.0074s0170 Salix purpurea SapurV1A.0074s0170 I 0.683
SapurV1A.0147s0490 Salix purpurea SapurV1A.0147s0490 I 0.685
SapurV1A.0162s0390 Salix purpurea SapurV1A.0162s0390 I 0.681
SapurV1A.0985s0170 Salix purpurea SapurV1A.0985s0170 I 0.685
SELMODRAFT_19475 Selaginella moellendorffii SELMODRAFT_19475 I 0.694
SELMODRAFT_29451 Selaginella moellendorffii SELMODRAFT_29451 I 0.694
SELMODRAFT_78481 Selaginella moellendorffii SELMODRAFT_78481 I 0.685
Si006457m.g Setaria italica Si006457m.g I 0.700
Si010077m.g Setaria italica Si010077m.g I 0.753
Si014685m.g Setaria italica Si014685m.g I 0.671
Si017289m.g Setaria italica Si017289m.g I 0.715
Solyc02g036370.2 Solanum lycopersicum Solyc02g036370.2 I 0.685
Solyc10g005080.2 Solanum lycopersicum Solyc10g005080.2 I 0.681
PGSC0003DMG400011294 Solanum tuberosum PGSC0003DMG400011294 I 0.681
PGSC0003DMG400021459 Solanum tuberosum PGSC0003DMG400021459 I 0.685
Sb04g031590 Sorghum bicolor Sb04g031590 I 0.715
Sb06g026500 Sorghum bicolor Sb06g026500 I 0.753
Sb07g003870 Sorghum bicolor Sb07g003870 I 0.671
Sb10g030960 Sorghum bicolor Sb10g030960 I 0.700
TCM_005021 Theobroma cacao TCM_005021 I 0.681
TCM_013400 Theobroma cacao TCM_013400 I 0.700
Traes_2AL_660616C44 Triticum aestivum Traes_2AL_660616C44 I 0.742
Traes_2BL_3041037F1 Triticum aestivum Traes_2BL_3041037F1 I 0.742
Traes_2DL_31EED5C94 Triticum aestivum Traes_2DL_31EED5C94 I 0.742
Traes_6BL_2F2381640 Triticum aestivum Traes_6BL_2F2381640 I 0.715
Traes_7AL_19F222799 Triticum aestivum Traes_7AL_19F222799 I 0.671
Traes_7AL_665B92F4E Triticum aestivum Traes_7AL_665B92F4E I 0.700
Traes_7BL_998EC9F74 Triticum aestivum Traes_7BL_998EC9F74 I 0.671
Traes_7BL_BA181D2AD Triticum aestivum Traes_7BL_BA181D2AD I 0.700
Traes_7DL_1D415A4CF Triticum aestivum Traes_7DL_1D415A4CF I 0.700
Traes_7DL_310E46F15 Triticum aestivum Traes_7DL_310E46F15 I 0.671
TRIUR3_01040 Triticum urartu TRIUR3_01040 I 0.700
TRIUR3_13396 Triticum urartu TRIUR3_13396 I 0.671
RVE1 Vitis vinifera VIT_04s0079g00410 I 0.685
VIT_15s0048g02410 Vitis vinifera VIT_15s0048g02410 I 0.681
gw1.8.161.1 Volvox carteri gw1.8.161.1 I 0.680
GRMZM2G014902 Zea mays GRMZM2G014902 I 0.671
GRMZM2G029850 Zea mays GRMZM2G029850 I 0.715
GRMZM2G145041 Zea mays GRMZM2G145041 I 0.700
GRMZM2G170322 Zea mays GRMZM2G170322 I 0.684
GRMZM2G175265 Zea mays GRMZM2G175265 I 0.671
GRMZM2G181030 Zea mays GRMZM2G181030 I 0.743