Aquca_027_00135 (Aquilegia coerulea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Aquca_027_00135 T285587_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.863 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.840 0.848
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.840 0.848
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.840 0.848
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.824 0.848
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.824 0.848
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.824 0.848
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.824 0.826
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.824 0.826
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.816 0.804
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.806 0.783
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.806 0.783
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.806 0.783
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.702 0.717
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.702 0.717
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.702 0.717
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.670 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_027_00135.1 Myb 39 84
Aquca_027_00135.2 Myb 39 84

Links

Other Myb/SANT family TFs
Other Aquilegia coerulea TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_029500 Albugo laibachii ALNC14_029500 N
PK06453.1 Cannabis sativa PK06453.1 I
fgenesh1_pg.C_scaffold_11000265 Phytophthora capsici fgenesh1_pg.C_scaffold_11000265 N
estExt_fgenesh1_pg.C_40260 Phytophthora capsici estExt_fgenesh1_pg.C_40260 N
fgenesh_scip_prom.46568.7327 Phytophthora kernoviae fgenesh_scip_prom.46568.7327 N
fgenesh_scip_prom.46568.8840 Phytophthora kernoviae fgenesh_scip_prom.46568.8840 I
F443_03239 Phytophthora parasitica F443_03239 N
F443_16339 Phytophthora parasitica F443_16339 N
Phyra73321 Phytophthora ramorum Phyra73321 N
Physo131337 Phytophthora sojae Physo131337 N
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I
maker-pag1_scaffold_151-fgenesh-gene-0.1 Pythium aphanidermatum maker-pag1_scaffold_151-fgenesh-gene-0.1 I
maker-pag1_scaffold_154-snap-gene-0.25 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.25 N
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N
maker-par_contig_2748-snap-gene-0.2 Pythium arrhenomanes maker-par_contig_2748-snap-gene-0.2 I
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I
maker-pir_contig_945-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_945-fgenesh-gene-0.0 N
maker-pir_contig_524-snap-gene-0.12 Pythium irregulare maker-pir_contig_524-snap-gene-0.12 N
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I
maker-pir_contig_1094-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_1094-fgenesh-gene-0.0 N
maker-piw_contig_1647-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1647-fgenesh-gene-0.1 N
maker-piw_contig_1647-snap-gene-0.3 Pythium iwayamai maker-piw_contig_1647-snap-gene-0.3 N
maker-piw_contig_4506-fgenesh-gene-0.0 Pythium iwayamai maker-piw_contig_4506-fgenesh-gene-0.0 N
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I
PYU1_G002849 Pythium ultimum PYU1_G002849 I
PYU1_G003089 Pythium ultimum PYU1_G003089 N
PYU1_G003099 Pythium ultimum PYU1_G003099 N
maker-pve_contig_364-fgenesh-gene-0.6 Pythium vexans maker-pve_contig_364-fgenesh-gene-0.6 N