CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_fgenesh1_pg.C_40260
(
Phytophthora capsici
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
estExt_fgenesh1_pg.C_40260
T290802_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_40260
Myb
48
94
GKAWTREEHARFLVALDVFPSGPWKAIADYVGTKDSRQTMTHAQKYR
Links
Other
Myb/SANT
family TFs
Other
Phytophthora capsici
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo131337
Phytophthora sojae
Physo131337
N
0.891
Phyra73321
Phytophthora ramorum
Phyra73321
N
0.883
fgenesh_scip_prom.46568.7327
Phytophthora kernoviae
fgenesh_scip_prom.46568.7327
N
0.857
fgenesh_scip_prom.28083.3853
Phytophthora lateralis
fgenesh_scip_prom.28083.3853
N
0.852
fgenesh1_pg.C_scaffold_11000265
Phytophthora capsici
fgenesh1_pg.C_scaffold_11000265
N
0.831
maker-pve_contig_364-fgenesh-gene-0.6
Pythium vexans
maker-pve_contig_364-fgenesh-gene-0.6
N
0.817
F443_03239
Phytophthora parasitica
F443_03239
N
0.807
maker-piw_contig_1647-fgenesh-gene-0.1
Pythium iwayamai
maker-piw_contig_1647-fgenesh-gene-0.1
N
0.795
PYU1_G003089
Pythium ultimum
PYU1_G003089
N
0.795
maker-pag1_scaffold_154-snap-gene-0.25
Pythium aphanidermatum
maker-pag1_scaffold_154-snap-gene-0.25
N
0.791
F443_16339
Phytophthora parasitica
F443_16339
N
0.779
maker-pir_contig_524-snap-gene-0.12
Pythium irregulare
maker-pir_contig_524-snap-gene-0.12
N
0.776
ALNC14_029500
Albugo laibachii
ALNC14_029500
N
0.746
maker-pir_contig_1094-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_1094-fgenesh-gene-0.0
N
0.734
maker-pag1_scaffold_154-snap-gene-0.26
Pythium aphanidermatum
maker-pag1_scaffold_154-snap-gene-0.26
N
0.728
PYU1_G002849
Pythium ultimum
PYU1_G002849
I
0.707
maker-pir_contig_516-fgenesh-gene-0.8
Pythium irregulare
maker-pir_contig_516-fgenesh-gene-0.8
N
0.689
maker-piw_contig_637-fgenesh-gene-0.5
Pythium iwayamai
maker-piw_contig_637-fgenesh-gene-0.5
I
0.689
maker-piw_contig_1647-snap-gene-0.3
Pythium iwayamai
maker-piw_contig_1647-snap-gene-0.3
N
0.687
PYU1_G003099
Pythium ultimum
PYU1_G003099
N
0.687
maker-piw_contig_4506-fgenesh-gene-0.0
Pythium iwayamai
maker-piw_contig_4506-fgenesh-gene-0.0
N
0.676
PK06453.1
Cannabis sativa
PK06453.1
I
0.668
maker-pir_contig_548-fgenesh-gene-0.3
Pythium irregulare
maker-pir_contig_548-fgenesh-gene-0.3
I
0.666
PYU1_G002847
Pythium ultimum
PYU1_G002847
N
0.666
maker-pir_contig_945-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_945-fgenesh-gene-0.0
N
0.665