Bostr.2021s0106 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.2021s0106 T285748_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATMYB121
M07091_2.00 		Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN		 Dap-seq
OMalley et al.(2016)
MYB121_col_a 		0.757 0.806
MYB62
M07027_2.00 		Arabidopsis thaliana
NHRCCTAAYTWNHNN
NNDNWARTTAGGYDN		 Dap-seq
OMalley et al.(2016)
MYB62_col_a 		0.727 0.720
MYB62
M07028_2.00 		Arabidopsis thaliana
HNKRCCTAACTHH
DDAGTTAGGYMND		 Dap-seq
OMalley et al.(2016)
MYB62_colamp_a 		0.727 0.720
MYB116
M07014_2.00 		Arabidopsis thaliana
NRCCTAAYTWNWNNN
NNNWNWARTTAGGYN		 Dap-seq
OMalley et al.(2016)
MYB116_col_a 		0.708 0.688
MYB116
M07015_2.00 		Arabidopsis thaliana
HNTRCCTAACTHH
DDAGTTAGGYAND		 Dap-seq
OMalley et al.(2016)
MYB116_colamp_a 		0.708 0.688
MYB59
M00883_2.00 		Arabidopsis thaliana
NKACCTAAYN
NRTTAGGTMN		 PBM
Franco-Zorrilla et al.(2014)
MYB59 		0.673 0.710
MYB05_ANTMA
M11067_2.00 		Antirrhinum majus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYB305_Q3 		0.669 0.753
MYB108
M07065_2.00 		Arabidopsis thaliana
RCCWAAYYNNNNHNH
DNDNNNNRRTTWGGY		 Dap-seq
OMalley et al.(2016)
BOS1_col_a 		0.666 0.699
MYB24
M02311_2.00 		Arabidopsis thaliana
RCCDAMYNN
NNRKTHGGY		 PBM
Weirauch et al.(2014)
pTH8662 		0.664 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.2021s0106.1.p Myb 20 67
Bostr.2021s0106.1.p Myb 73 118

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

543 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCJAG00000000033 Callithrix jacchus ENSCJAG00000000033 I
ENSCSAG00000001640 Chlorocebus sabaeus ENSCSAG00000001640 I
ENSGGOG00000014653 Gorilla gorilla ENSGGOG00000014653 I
ZNF548 Homo sapiens ENSG00000188785 D
ENSP00000337555 Macaca fascicularis ENSP00000337555 I
ENSMMUG00000014281 Macaca mulatta ENSMMUG00000014281 I
ENSNLEG00000010956 Nomascus leucogenys ENSNLEG00000010956 I
ENSOGAG00000032722 Otolemur garnettii ENSOGAG00000032722 N
ZNF548 Pan troglodytes ENSPTRG00000024292 I
ENSPANG00000020840 Papio anubis ENSPANG00000020840 I
ENSPPYG00000010464 Pongo abelii ENSPPYG00000010464 I
ENSTSYG00000010306 Tarsius syrichta ENSTSYG00000010306 I