CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000010464
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000010464
T107034_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF548
M07691_2.00
Homo sapiens
CCTGCHGVCVCCBBSVYYBBG
CVVRRBSVVGGBGBCDGCAGG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF548.RCADE.OriginalMapping
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000011726
C2H2 ZF
200
222
YKCSECGKTFTCSYSFVEHQKIH
ENSPPYP00000011726
C2H2 ZF
228
250
YECNKCGKFFKYSANFMKHQTVH
ENSPPYP00000011726
C2H2 ZF
256
278
YECRECGKSFMYNYRLMRHKRVH
ENSPPYP00000011726
C2H2 ZF
284
306
YECNTCGKFFRYSSTFVRHQRVH
ENSPPYP00000011726
C2H2 ZF
312
334
YECRECGKFFMDSSTLIKHQRVH
ENSPPYP00000011726
C2H2 ZF
340
362
YKCNDCGKFFRYISTLIRHQRIH
ENSPPYP00000011726
C2H2 ZF
368
390
YECSVCGELFRYNSSLVKHWRNH
ENSPPYP00000011726
C2H2 ZF
396
418
YKCSECGKSFRYHCRLIRHQRVH
ENSPPYP00000011726
C2H2 ZF
424
446
YECSECGKFFRYNSNLIKHWRNH
ENSPPYP00000011726
C2H2 ZF
452
474
YECRECGKAFSHKHILVEHQKIH
ENSPPYP00000011726
C2H2 ZF
480
502
YECSECQKAFIRKSHLVHHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF548
Homo sapiens
ENSG00000188785
D
0.827
ENSGGOG00000014653
Gorilla gorilla
ENSGGOG00000014653
I
0.827
ZNF548
Pan troglodytes
ENSPTRG00000024292
I
0.827
ENSNLEG00000010956
Nomascus leucogenys
ENSNLEG00000010956
I
0.826
ENSCSAG00000001640
Chlorocebus sabaeus
ENSCSAG00000001640
I
0.824
ENSMMUG00000014281
Macaca mulatta
ENSMMUG00000014281
I
0.824
ENSPANG00000020840
Papio anubis
ENSPANG00000020840
I
0.824
ENSP00000337555
Macaca fascicularis
ENSP00000337555
I
0.824
ENSCJAG00000000033
Callithrix jacchus
ENSCJAG00000000033
I
0.817
ENSTSYG00000000332
Tarsius syrichta
ENSTSYG00000000332
I
0.811
ENSTSYG00000010306
Tarsius syrichta
ENSTSYG00000010306
I
0.811