Cagra.5588s0009 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.5588s0009 T286166_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.828 0.894
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.828 0.894
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.820 0.872
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.820 0.851
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.802 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5588s0009.1.p Myb 545 595

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_02947 Arthroderma benhamiae ARB_02947 I
MCYG_00495 Arthroderma otae MCYG_00495 I
fgenesh1_pg.00118_#_483 Aspergillus carbonarius fgenesh1_pg.00118_#_483 I
ACLA_081960 Aspergillus clavatus CADACLAG00007570 I
CADAFLAG00003022 Aspergillus flavus CADAFLAG00003022 I
AFUA_6G07800 Aspergillus fumigatus CADAFUAG00001843 I
ANIA_01927 Aspergillus nidulans CADANIAG00008587 I
CADANGAG00008606 Aspergillus niger CADANGAG00008606 I
CADAORAG00000832 Aspergillus oryzae CADAORAG00000832 I
EURHEDRAFT_515455 Aspergillus ruber EURHEDRAFT_515455 I
ATEG_05884 Aspergillus terreus CADATEAG00001041 I
BDDG_08552 Blastomyces dermatitidis BDDG_08552 I
PVAR5_6206 Byssochlamys spectabilis PVAR5_6206 I
CLUG_04669 Candida lusitaniae CLUG_04669 N
CLUG_04669 Clavispora lusitaniae CLUG_04669 N
CIMG_01271 Coccidioides immitis CIMG_01271 I
CPC735_051290 Coccidioides posadasii CPC735_051290 I
CFIO01_03460 Colletotrichum fioriniae CFIO01_03460 I
CGGC5_13834 Colletotrichum gloeosporioides CGGC5_13834 I
GLRG_10614 Colletotrichum graminicola GLRG_10614 I
CH063_10711 Colletotrichum higginsianum CH063_10711 I
Cob_10943 Colletotrichum orbiculare Cob_10943 I
CSUB01_07077 Colletotrichum sublineola CSUB01_07077 I
CCM_04464 Cordyceps militaris CCM_04464 I
DEHA2E16280g Debaryomyces hansenii DEHA2E16280g I
PAS_chr1-3_0233 Komagataella pastoris PAS_chr1-3_0233 I
KUCA_T00003643001 Kuraishia capsulata KUCA_T00003643001 I
LELG_04175 Lodderomyces elongisporus LELG_04175 N
MBM_06383 Marssonina brunnea MBM_06383 I
MCYG_00495 Microsporum canis MCYG_00495 I
MGYG_01468 Microsporum gypseum MGYG_01468 I
GNLVRS01_PISO0N20913g Millerozyma farinosa GNLVRS01_PISO0N20913g N
NFIA_053460 Neosartorya fischeri CADNFIAG00004356 I
Pc12g09500 Penicillium chrysogenum Pc12g09500 I
PDIP_36670 Penicillium digitatum PDIP_36670 I
PEX1_040030 Penicillium expansum PEX1_040030 I
PITC_095760 Penicillium italicum PITC_095760 I
PMAA_030710 Penicillium marneffei PMAA_030710 I
PDE_08867 Penicillium oxalicum PDE_08867 I
PCH_Pc12g09500 Penicillium rubens PCH_Pc12g09500 I
U727_00433560451 Penicillium solitum U727_00433560451 I
XP_002489576.1 Pichia pastoris XP_002489576.1 I
PMAA_030710 Talaromyces marneffei PMAA_030710 I
TSTA_067480 Talaromyces stipitatus TSTA_067480 I
TEQG_06861 Trichophyton equinum TEQG_06861 I
H101_07442 Trichophyton interdigitale H101_07442 I
H102_07413 Trichophyton rubrum H102_07413 I
H105_07443 Trichophyton soudanense H105_07443 I
TESG_04227 Trichophyton tonsurans TESG_04227 I
TRV_00539 Trichophyton verrucosum TRV_00539 I
BN7_6301 Wickerhamomyces ciferrii BN7_6301 N