Carubv10000643m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10000643m.g T286203_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB3R5
M07116_2.00 		Arabidopsis thaliana
NWWWWNTDRCCGTTR
YAACGGYHANWWWWN		 Dap-seq
OMalley et al.(2016)
MYB3R5_col_a 		0.860 0.971
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.685 0.786
PK12011.1
M01279_2.00 		Cannabis sativa
HAACGGHHNN
NNDDCCGTTD		 PBM
Lambert et al.(2019)
pTH11423 		0.682 0.800
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.675 0.743
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.675 0.743
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10000643m Myb 75 121
Carubv10000643m Myb 127 173
Carubv10000643m Myb 179 224

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_063340 Acremonium chrysogenum ACRE_063340 I
AOL_s00215g23 Arthrobotrys oligospora AOL_s00215g23 I
M437DRAFT_69578 Aureobasidium melanogenum M437DRAFT_69578 I
M438DRAFT_301560 Aureobasidium pullulans M438DRAFT_301560 I
AUEXF2481DRAFT_200794 Aureobasidium subglaciale AUEXF2481DRAFT_200794 I
BAUCODRAFT_123202 Baudoinia compniacensis BAUCODRAFT_123202 I
BBA_05156 Beauveria bassiana BBA_05156 I
COCC4DRAFT_82054 Bipolaris maydis COCC4DRAFT_82054 I
COCMIDRAFT_79558 Bipolaris oryzae COCMIDRAFT_79558 I
COCSADRAFT_84232 Bipolaris sorokiniana COCSADRAFT_84232 I
COCVIDRAFT_30945 Bipolaris victoriae COCVIDRAFT_30945 I
COCCADRAFT_96484 Bipolaris zeicola COCCADRAFT_96484 I
Bcin01g01680 Botrytis cinerea Bcin01g01680 I
CHGG_04631 Chaetomium globosum CHGG_04631 I
CPUR_01500 Claviceps purpurea CPUR_01500 I
estExt_Genewise1Plus.C_160056 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_160056 I
CFIO01_00459 Colletotrichum fioriniae CFIO01_00459 I
CGGC5_12311 Colletotrichum gloeosporioides CGGC5_12311 I
GLRG_08331 Colletotrichum graminicola GLRG_08331 I
CH063_09856 Colletotrichum higginsianum CH063_09856 I
Cob_10480 Colletotrichum orbiculare Cob_10480 I
CSUB01_02028 Colletotrichum sublineola CSUB01_02028 I
estExt_fgenesh1_pg.C_30644 Cryphonectria parasitica estExt_fgenesh1_pg.C_30644 I
H072_3680 Dactylellina haptotyla H072_3680 I
DOTSEDRAFT_73058 Dothistroma septosporum DOTSEDRAFT_73058 I
DRE_03937 Drechslerella stenobrocha DRE_03937 I
UCREL1_3643 Eutypa lata UCREL1_3643 I
A1O9_06885 Exophiala aquamarina A1O9_06885 I
FFUJ_05056 Fusarium fujikuroi FFUJ_05056 I
FGRRES_17645 Fusarium graminearum FGRRES_17645 I
FOXG_08626 Fusarium oxysporum FOXG_08626 I
FPSE_04959 Fusarium pseudograminearum FPSE_04959 I
NechaG32419 Fusarium solani NechaG32419 I
FVEG_06046 Fusarium verticillioides FVEG_06046 I
GGTG_02776 Gaeumannomyces graminis GGTG_02776 I
CMQ_3812 Grosmannia clavigera CMQ_3812 I
LEMA_P007120.1 Leptosphaeria maculans LEMA_P007120.1 I
MPH_13649 Macrophomina phaseolina MPH_13649 I
MGG_01734 Magnaporthe oryzae MGG_01734 I
MAPG_01726 Magnaporthe poae MAPG_01726 I
MBM_07850 Marssonina brunnea MBM_07850 I
MBR_00455 Metarhizium brunneum MBR_00455 I
MGU_01088 Metarhizium guizhouense MGU_01088 I
MAJ_01818 Metarhizium majus MAJ_01818 I
MYCTH_2298863 Myceliophthora thermophila MYCTH_2298863 I
estExt_fgenesh1_pm.C_chr_60224 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_60224 I
e_gw1.18.1708.1 Nectria haematococca e_gw1.18.1708.1 I
UCRNP2_7317 Neofusicoccum parvum UCRNP2_7317 I
clr-1 Neurospora crassa NCU07705 D
estExt_Genewise1.C_31390 Neurospora discreta estExt_Genewise1.C_31390 I
NEUTE1DRAFT_78712 Neurospora tetrasperma NEUTE1DRAFT_78712 I
OIDMADRAFT_109343 Oidiodendron maius OIDMADRAFT_109343 I
F503_05241 Ophiostoma piceae uamh F503_05241 I
PFICI_04537 Pestalotiopsis fici PFICI_04537 I
PODANS_6_2840 Podospora anserina PODANS_6_2840 I
V499_08273 Pseudogymnoascus pannorum V499_08273 I
PTT_14843 Pyrenophora teres PTT_14843 I
SAPIO_CDS7108 Scedosporium apiospermum SAPIO_CDS7108 I
SBOR_2384 Sclerotinia borealis SBOR_2384 I
SS1G_13144 Sclerotinia sclerotiorum SS1G_13144 I
SETTUDRAFT_20488 Setosphaeria turcica SETTUDRAFT_20488 I
SMAC_00847 Sordaria macrospora SMAC_00847 I
SEPMUDRAFT_163837 Sphaerulina musiva SEPMUDRAFT_163837 I
SPBR_01382 Sporothrix brasiliensis SPBR_01382 I
HMPREF1624_03268 Sporothrix schenckii HMPREF1624_03268 I
S40288_06279 Stachybotrys chartarum S40288_06279 I
S40285_00264 Stachybotrys chlorohalonata S40285_00264 I
SNOG_03108 Stagonospora nodorum SNOG_03108 I
THITE_2115249 Thielavia terrestris THITE_2115249 I
VHEMI03626 Torrubiella hemipterigena VHEMI03626 I
PV09_03439 Verruconis gallopava PV09_03439 I
VDBG_00821 Verticillium alfalfae VDBG_00821 I
VDAG_00432 Verticillium dahliae VDAG_00432 I
Mycgr3G100535 Zymoseptoria tritici Mycgr3G100535 I