Eucgr.C02280 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.C02280 T286795_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.787 0.882
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.787 0.882
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.C02280.1 Myb 14 62
Eucgr.C02280.1 Myb 68 113

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

491 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004960 Ailuropoda melanoleuca ENSAMEG00000004960 I
ACOM031533 Anopheles coluzzii ACOM031533 I
ADAC001343 Anopheles darlingi ADAC001343 N
ASTEI04565 Anopheles stephensi ASTEI04565 N
ENSBTAP00000049813-D1 Bos grunniens ENSBTAP00000049813-D1 I
ENSCJAG00000032154 Callithrix jacchus ENSCJAG00000032154 I
ENSCJAG00000031259 Callithrix jacchus ENSCJAG00000031259 I
ENSCJAG00000021948 Callithrix jacchus ENSCJAG00000021948 I
DUXA Canis familiaris ENSCAFG00000002431 I
ENSCSAG00000001657 Chlorocebus sabaeus ENSCSAG00000001657 I
ENSDNOG00000049160 Dasypus novemcinctus ENSDNOG00000049160 I
ENSDNOG00000025505 Dasypus novemcinctus ENSDNOG00000025505 I
ENSDNOG00000046863 Dasypus novemcinctus ENSDNOG00000046863 I
DUXA Equus caballus ENSECAG00000021112 I
DUXA Felis catus ENSFCAG00000007545 I
DUXA Gorilla gorilla ENSGGOG00000005650 I
DUXA Homo sapiens ENSG00000258873 D
DUXA Loxodonta africana ENSLAFG00000030167 I
DUXA Macaca mulatta ENSMMUG00000007788 I
DUXA Microcebus murinus ENSMICG00000006042 I
ENSMICG00000015060 Microcebus murinus ENSMICG00000015060 I
ENSMICG00000006881 Microcebus murinus ENSMICG00000006881 I
NEMVEDRAFT_v1g38792 Nematostella vectensis NEMVEDRAFT_v1g38792 I
NEMVEDRAFT_v1g92436 Nematostella vectensis NEMVEDRAFT_v1g92436 I
NEMVEDRAFT_v1g92500 Nematostella vectensis NEMVEDRAFT_v1g92500 I
DUXA Oryctolagus cuniculus ENSOCUG00000011331 I
ENSOARG00000003446 Ovis aries ENSOARG00000003446 I
DUXA Pan troglodytes ENSPTRG00000028871 I
ENSPANG00000009357 Papio anubis ENSPANG00000009357 I
ENSPPYG00000010457 Pongo abelii ENSPPYG00000010457 I
DUXA Tursiops truncatus ENSTTRG00000014200 I