Gorai.001G263600 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.001G263600 T287481_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB118
M07087_2.00 		Arabidopsis thaliana
DHWDHRDMCGTTACDWW
WWHGTAACGKHYDHWDH		 Dap-seq
OMalley et al.(2016)
MYB118_col_a 		0.777 0.849
MYB118
M07088_2.00 		Arabidopsis thaliana
DWWWYGTAACGKHYR
YRDMCGTTACRWWWH		 Dap-seq
OMalley et al.(2016)
MYB118_colamp_a 		0.777 0.849
MYB98
M02301_2.00 		Arabidopsis thaliana
NNGTAACGKMN
NKMCGTTACNN		 PBM
Weirauch et al.(2014)
pTH8148 		0.683 0.785
MYB98
M07108_2.00 		Arabidopsis thaliana
DWWWHGTAACGKWHD
HDWMCGTTACDWWWH		 Dap-seq
OMalley et al.(2016)
MYB98_col_a 		0.683 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.001G263600.1 Myb 259 305
Gorai.001G263600.1 Myb 311 356

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001635 Acyrthosiphon pisum ACYPI001635 N 0.000
Alligator_sinensis_CCG000862.1 Alligator sinensis Alligator_sinensis_CCG000862.1 N 0.000
ENSAMXG00000020327 Astyanax mexicanus ENSAMXG00000020327 N 0.000
ACEP14936 Atta cephalotes ACEP14936 N 0.000
BGLB001139 Biomphalaria glabrata BGLB001139 N 0.000
NPAS1 Bos taurus ENSBTAG00000015576 N 0.000
gw.84.113.1 Branchiostoma floridae gw.84.113.1 N 0.000
NPAS1 Callithrix jacchus ENSCJAG00000011666 N 0.000
Cflo_02462--XP_391937.2_APIME Camponotus floridanus Cflo_02462--XP_391937.2_APIME N 0.000
NPAS1 Canis familiaris ENSCAFG00000032405 N 0.000
NPAS1 Cavia porcellus ENSCPOG00000023069 N 0.000
Cmyd_10005570 Chelonia mydas Cmyd_10005570 N 0.000
ENSCSAG00000003006 Chlorocebus sabaeus ENSCSAG00000003006 N 0.000
CLEC007310 Cimex lectularius CLEC007310 N 0.000
CGI_10014877 Crassostrea gigas CGI_10014877 N 0.000
npas1 Danio rerio ENSDARG00000015876 N 0.000
DAPPUDRAFT_59022 Daphnia pulex DAPPUDRAFT_59022 N 0.000
NPAS1 Dasypus novemcinctus ENSDNOG00000035321 N 0.000
GF24890 Drosophila ananassae FBgn0101882 N 0.000
GG14662 Drosophila erecta FBgn0106918 N 0.000
GH23748 Drosophila grimshawi FBgn0131205 N 0.000
GH15456 Drosophila grimshawi FBgn0122928 N 0.000
trh Drosophila melanogaster FBgn0262139 N 0.000
GI16736 Drosophila mojavensis FBgn0139484 N 0.000
GA19928 Drosophila pseudoobscura FBgn0079924 N 0.000
trh Drosophila sechellia FBgn0025046 N 0.000
GD25707 Drosophila simulans FBgn0196992 N 0.000
GJ12482 Drosophila virilis FBgn0199724 N 0.000
GK20151 Drosophila willistoni FBgn0222148 N 0.000
GE21022 Drosophila yakuba FBgn0238304 N 0.000
NPAS1 Felis catus ENSFCAG00000004833 N 0.000
ENSGMOG00000016149 Gadus morhua ENSGMOG00000016149 N 0.000
npas1 Gasterosteus aculeatus ENSGACG00000009494 N 0.000
NPAS1 Gorilla gorilla ENSGGOG00000013398 N 0.000
Hsal_10736--XP_391937.2_APIME Harpegnathos saltator Hsal_10736--XP_391937.2_APIME N 0.000
HelroG63031 Helobdella robusta HelroG63031 N 0.000
NPAS1 Homo sapiens ENSG00000130751 N 0.000
ENSSTOG00000003396 Ictidomys tridecemlineatus ENSSTOG00000003396 N 0.000
ISCW018625 Ixodes scapularis ISCW018625 N 0.000
ENSLOCG00000014899 Lepisosteus oculatus ENSLOCG00000014899 N 0.000
ENSLOCG00000009512 Lepisosteus oculatus ENSLOCG00000009512 N 0.000
LDEC011477 Leptinotarsa decemlineata LDEC011477 N 0.000
LotgiG127403 Lottia gigantea LotgiG127403 N 0.000
LCUP010821 Lucilia cuprina LCUP010821 N 0.000
ENSP00000405290 Macaca fascicularis ENSP00000405290 N 0.000
NPAS1 Macaca mulatta ENSMMUG00000011330 N 0.000
ENSMEUG00000000606 Macropus eugenii ENSMEUG00000000606 N 0.000
ENSMGAG00000016559 Meleagris gallopavo ENSMGAG00000016559 N 0.000
MCINX015160 Melitaea cinxia MCINX015160 N 0.000
NPAS1 Microcebus murinus ENSMICG00000006346 N 0.000
NPAS1 Monodelphis domestica ENSMODG00000009053 N 0.000
MDOA009035 Musca domestica MDOA009035 N 0.000
ENSMPUG00000005118 Mustela putorius furo ENSMPUG00000005118 N 0.000
Npas1 Mus musculus ENSMUSG00000001988 N 0.000
NV13641 Nasonia vitripennis NV13641 N 0.000
ENSNLEG00000002946 Nomascus leucogenys ENSNLEG00000002946 N 0.000
NPAS1 Ochotona princeps ENSOPRG00000014860 N 0.000
Ocbimv22029779m.g Octopus bimaculoides Ocbimv22029779m.g N 0.000
NPAS3 Oryzias latipes ENSORLG00000018065 N 0.000
ENSORLG00000006931 Oryzias latipes ENSORLG00000006931 N 0.000
NPAS1 Otolemur garnettii ENSOGAG00000012829 N 0.000
ENSOARG00000010869 Ovis aries ENSOARG00000010869 N 0.000
NPAS1 Pan troglodytes ENSPTRG00000011199 N 0.000
ENSPANG00000014704 Papio anubis ENSPANG00000014704 N 0.000
PHUM613040 Pediculus humanus PHUM613040 N 0.000
ENSPMAG00000007632 Petromyzon marinus ENSPMAG00000007632 N 0.000
ENSPFOG00000008940 Poecilia formosa ENSPFOG00000008940 N 0.000
ENSPCAG00000000784 Procavia capensis ENSPCAG00000000784 N 0.000
Npas1 Rattus norvegicus ENSRNOG00000015376 N 0.000
ENSSARG00000014127 Sorex araneus ENSSARG00000014127 N 0.000
SPER_0003947801 Spirometra erinaceieuropaei SPER_0003947801 N 0.000
SMAR015279 Strigamia maritima SMAR015279 N 0.000
NPAS1 Sus scrofa ENSSSCG00000003108 N 0.000
npas1 Takifugu rubripes ENSTRUG00000012318 N 0.000
TC001448 Tribolium castaneum TC001448 N 0.000
NPAS1 Tursiops truncatus ENSTTRG00000011416 N 0.000
ENSXMAG00000004213 Xiphophorus maculatus ENSXMAG00000004213 N 0.000
L798_01241 Zootermopsis nevadensis L798_01241 N 0.000