Gorai.008G132000 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.008G132000 T287668_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.899 0.957
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.891 0.935
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.891 0.935
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.854 0.891
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.854 0.891
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.800 0.826
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.800 0.826
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.800 0.826
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.800 0.826
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.800 0.826
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.767 0.848
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.767 0.848
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.767 0.848
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.766 0.826
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G132000.1 Myb 24 69
Gorai.008G132000.2 Myb 24 69
Gorai.008G132000.3 Myb 24 69
Gorai.008G132000.4 Myb 24 69
Gorai.008G132000.5 Myb 24 69

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

297 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02308 Aegilops tauschii F775_02308 I 0.000
F775_02328 Aegilops tauschii F775_02328 I 0.000
F775_14365 Aegilops tauschii F775_14365 I 0.000
F775_16000 Aegilops tauschii F775_16000 I 0.000
AMTR_s00003p00252470 Amborella trichopoda AMTR_s00003p00252470 I 0.000
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.000
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.000
Aquca_059_00027 Aquilegia coerulea Aquca_059_00027 I 0.000
anac025 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000277 I 0.000
NAM Arabidopsis lyrata fgenesh2_kg.1__4366__AT1G52880.1 I 0.000
ATNAC2 Arabidopsis lyrata fgenesh2_kg.3__1698__AT3G15510.1 I 0.000
NAC018 Arabidopsis thaliana AT1G52880 D 0.000
NAC025 Arabidopsis thaliana AT1G61110 D 0.000
NAC056 Arabidopsis thaliana AT3G15510 I 0.000
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.000
Bostr.10040s0089 Boechera stricta Bostr.10040s0089 I 0.000
Bostr.28625s0148 Boechera stricta Bostr.28625s0148 I 0.000
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.000
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.000
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.000
Bo01282s010 Brassica oleracea Bo01282s010 I 0.000
Bo1g128420 Brassica oleracea Bo1g128420 I 0.000
Bo5g127030 Brassica oleracea Bo5g127030 I 0.000
Bo6g030920 Brassica oleracea Bo6g030920 I 0.000
Bra018997 Brassica rapa Bra018997 I 0.000
Bra021114 Brassica rapa Bra021114 I 0.000
Bra027101 Brassica rapa Bra027101 I 0.000
Bra027237 Brassica rapa Bra027237 I 0.000
PK08629.1 Cannabis sativa PK08629.1 I 0.000
PK19059.1 Cannabis sativa PK19059.1 I 0.000
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.000
Cagra.2213s0001 Capsella grandiflora Cagra.2213s0001 I 0.000
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.000
Carubv10014008m.g Capsella rubella Carubv10014008m.g I 0.000
Carubv10021371m.g Capsella rubella Carubv10021371m.g I 0.000
evm.TU.supercontig_27.81 Carica papaya evm.TU.supercontig_27.81 I 0.000
evm.TU.supercontig_80.94 Carica papaya evm.TU.supercontig_80.94 I 0.000
Ca_06901 Cicer arietinum Ca_06901 I 0.000
Ca_12031 Cicer arietinum Ca_12031 I 0.000
Ca_16379 Cicer arietinum Ca_16379 I 0.000
Ca_19654 Cicer arietinum Ca_19654 I 0.000
Cla011948 Citrullus lanatus Cla011948 I 0.000
Cla023771 Citrullus lanatus Cla023771 I 0.000
Ciclev10008628m.g Citrus clementina Ciclev10008628m.g I 0.000
Ciclev10015688m.g Citrus clementina Ciclev10015688m.g I 0.000
orange1.1g016791m.g Citrus sinensis orange1.1g016791m.g I 0.000
orange1.1g017854m.g Citrus sinensis orange1.1g017854m.g I 0.000
Cucsa.074600 Cucumis sativus Cucsa.074600 I 0.000
Cucsa.341790 Cucumis sativus Cucsa.341790 I 0.000
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.000
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.000
Thhalv10012308m.g Eutrema salsugineum Thhalv10012308m.g I 0.000
Thhalv10022353m.g Eutrema salsugineum Thhalv10022353m.g I 0.000
Thhalv10023591m.g Eutrema salsugineum Thhalv10023591m.g I 0.000
gene30439-v1.0-hybrid Fragaria vesca gene30439-v1.0-hybrid I 0.000
gene31150-v1.0-hybrid Fragaria vesca gene31150-v1.0-hybrid I 0.000
GLYMA06G38440 Glycine max GLYMA06G38440 I 0.000
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.000
GLYMA12G22790 Glycine max GLYMA12G22790 I 0.000
GLYMA13G31660 Glycine max GLYMA13G31660 I 0.000
GLYMA13G35560 Glycine max GLYMA13G35560 I 0.000
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.000
Gorai.002G073800 Gossypium raimondii Gorai.002G073800 I 0.000
Gorai.009G170700 Gossypium raimondii Gorai.009G170700 I 0.000
Gorai.009G433100 Gossypium raimondii Gorai.009G433100 I 0.000
Gorai.013G167100 Gossypium raimondii Gorai.013G167100 I 0.000
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.000
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.000
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.000
LPERR07G16320 Leersia perrieri LPERR07G16320 I 0.000
LPERR07G23420 Leersia perrieri LPERR07G23420 N 0.000
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.000
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.000
Lus10015076.g Linum usitatissimum Lus10015076.g N 0.000
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.000
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.000
Lus10032657.g Linum usitatissimum Lus10032657.g I 0.000
Lus10043095.g Linum usitatissimum Lus10043095.g I 0.000
LjSGA_023894.2 Lotus japonicus LjSGA_023894.2 I 0.000
MDP0000120881 Malus domestica MDP0000120881 I 0.000
MDP0000173636 Malus domestica MDP0000173636 I 0.000
MDP0000674514 Malus domestica MDP0000674514 I 0.000
MDP0000868419 Malus domestica MDP0000868419 I 0.000
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.000
cassava42314.valid.m1 Manihot esculenta cassava42314.valid.m1 I 0.000
cassava5169.m1 Manihot esculenta cassava5169.m1 I 0.000
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.000
MTR_2g080010 Medicago truncatula MTR_2g080010 I 0.000
MTR_4g089135 Medicago truncatula MTR_4g089135 I 0.000
mgf007362m Mimulus guttatus mgf007362m I 0.000
mgf016382m Mimulus guttatus mgf016382m I 0.000
mgf025001m Mimulus guttatus mgf025001m I 0.000
GSMUA_Achr1G08860_001 Musa acuminata GSMUA_Achr1G08860_001 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.000
GSMUA_Achr6G17720_001 Musa acuminata GSMUA_Achr6G17720_001 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
GSMUA_Achr9G19520_001 Musa acuminata GSMUA_Achr9G19520_001 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
OBART03G15960 Oryza barthii OBART03G15960 I 0.000
OBART07G19010 Oryza barthii OBART07G19010 I 0.000
OBART07G26600 Oryza barthii OBART07G26600 I 0.000
OB03G25680 Oryza brachyantha OB03G25680 I 0.000
OB05G24480 Oryza brachyantha OB05G24480 I 0.000
OB07G24770 Oryza brachyantha OB07G24770 I 0.000
OB07G32110 Oryza brachyantha OB07G32110 I 0.000
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.000
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.000
ORGLA07G0243600 Oryza glaberrima ORGLA07G0243600 I 0.000
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.000
OGLUM07G18780 Oryza glumaepatula OGLUM07G18780 I 0.000
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.000
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.000
ONAC010 Oryza indica BGIOSGA024071 I 0.000
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.000
OLONG_002265 Oryza longistaminata OLONG_002265 I 0.000
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.000
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.000
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.000
OMERI07G15720 Oryza meridionalis OMERI07G15720 I 0.000
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.000
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.000
ONIVA07G17340 Oryza nivara ONIVA07G17340 I 0.000
ONIVA07G26310 Oryza nivara ONIVA07G26310 I 0.000
OPUNC01G00300 Oryza punctata OPUNC01G00300 I 0.000
OPUNC07G17890 Oryza punctata OPUNC07G17890 I 0.000
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.000
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.000
ORUFI07G19770 Oryza rufipogon ORUFI07G19770 I 0.000
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.000
OS03G0327800 Oryza sativa OS03G0327800 I 0.000
ONAC010 Oryza sativa OS07G0566500 I 0.000
Pavir.Ba00642 Panicum virgatum Pavir.Ba00642 I 0.000
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.Ia03443 Panicum virgatum Pavir.Ia03443 I 0.000
Pavir.Ib01528 Panicum virgatum Pavir.Ib01528 I 0.000
Pavir.J08552 Panicum virgatum Pavir.J08552 I 0.000
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
POPTR_0004s03820 Populus trichocarpa POPTR_0004s03820 I 0.000
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.000
Pm009955 Prunus mume Pm009955 I 0.000
PRUPE_ppa007314mg Prunus persica PRUPE_ppa007314mg I 0.000
27961.m000091 Ricinus communis 27961.m000091 I 0.000
29851.m002359 Ricinus communis 29851.m002359 I 0.000
30078.m002348 Ricinus communis 30078.m002348 I 0.000
SapurV1A.0044s0420 Salix purpurea SapurV1A.0044s0420 I 0.000
SapurV1A.0299s0130 Salix purpurea SapurV1A.0299s0130 I 0.000
SELMODRAFT_105213 Selaginella moellendorffii SELMODRAFT_105213 I 0.000
SELMODRAFT_125697 Selaginella moellendorffii SELMODRAFT_125697 I 0.000
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.000
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.000
Si030267m.g Setaria italica Si030267m.g I 0.000
Si032676m.g Setaria italica Si032676m.g I 0.000
Si036303m.g Setaria italica Si036303m.g I 0.000
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.000
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.000
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.000
Sb02g036620 Sorghum bicolor Sb02g036620 I 0.000
Sb02g043210 Sorghum bicolor Sb02g043210 I 0.000
TCM_029931 Theobroma cacao TCM_029931 I 0.000
TCM_031363 Theobroma cacao TCM_031363 I 0.000
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.000
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.000
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.000
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.000
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.000
Traes_2DS_85FE89BC5 Triticum aestivum Traes_2DS_85FE89BC5 N 0.000
Traes_2DS_F5B34D422 Triticum aestivum Traes_2DS_F5B34D422 N 0.000
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.000
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.000
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.000
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.000
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.000
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.000
TRIUR3_32458 Triticum urartu TRIUR3_32458 N 0.000
anac025 Vitis vinifera VIT_00s0375g00040 I 0.000
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.000
VIT_19s0014g03300 Vitis vinifera VIT_19s0014g03300 I 0.000
GRMZM2G011598 Zea mays GRMZM2G011598 I 0.000
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000
GRMZM2G179885 Zea mays GRMZM2G179885 I 0.000
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.000