CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA06G38440
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA06G38440
T293050_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.942
0.839
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.942
0.839
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.913
0.875
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G38440.2
NAC/NAM
19
143
PPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAMASFGAEEWYFFSPRERKYPNGARPNRAATSGYWKATGTDKPICSGTQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRV
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
174 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA12G22790
Glycine max
GLYMA12G22790
I
0.967
Bo1g128420
Brassica oleracea
Bo1g128420
I
0.947
Bra021114
Brassica rapa
Bra021114
I
0.947
NAC018
Arabidopsis thaliana
AT1G52880
D
0.942
Bostr.0124s0081
Boechera stricta
Bostr.0124s0081
I
0.942
MDP0000674514
Malus domestica
MDP0000674514
I
0.941
NAM
Arabidopsis lyrata
fgenesh2_kg.1__4366__AT1G52880.1
I
0.940
Cagra.0946s0024
Capsella grandiflora
Cagra.0946s0024
I
0.939
Carubv10009524m.g
Capsella rubella
Carubv10009524m.g
I
0.939
anac025
Vitis vinifera
VIT_00s0375g00040
I
0.938
PK08629.1
Cannabis sativa
PK08629.1
I
0.927
POPTR_0011s04650
Populus trichocarpa
POPTR_0011s04650
I
0.926
PGSC0003DMG400019293
Solanum tuberosum
PGSC0003DMG400019293
I
0.924
PRUPE_ppa007577mg
Prunus persica
PRUPE_ppa007577mg
I
0.924
Solyc07g063420.2
Solanum lycopersicum
Solyc07g063420.2
I
0.924
Pm011604
Prunus mume
Pm011604
I
0.924
GLYMA07G31220
Glycine max
GLYMA07G31220
I
0.922
VIT_19s0014g03300
Vitis vinifera
VIT_19s0014g03300
I
0.921
NAC056
Arabidopsis thaliana
AT3G15510
I
0.918
Bra027237
Brassica rapa
Bra027237
I
0.918
ATNAC2
Arabidopsis lyrata
fgenesh2_kg.3__1698__AT3G15510.1
I
0.918
Bostr.28625s0148
Boechera stricta
Bostr.28625s0148
I
0.918
Carubv10014008m.g
Capsella rubella
Carubv10014008m.g
I
0.918
Lus10011215.g
Linum usitatissimum
Lus10011215.g
I
0.918
Lus10018469.g
Linum usitatissimum
Lus10018469.g
I
0.918
Thhalv10022353m.g
Eutrema salsugineum
Thhalv10022353m.g
I
0.918
LjSGA_023894.2
Lotus japonicus
LjSGA_023894.2
I
0.916
Bo5g127030
Brassica oleracea
Bo5g127030
I
0.915
MTR_4g089135
Medicago truncatula
MTR_4g089135
I
0.915
30078.m002348
Ricinus communis
30078.m002348
I
0.915
Bra001597
Brassica rapa
Bra001597
I
0.914
NAC025
Arabidopsis thaliana
AT1G61110
D
0.913
anac025
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000277
I
0.913
OB07G24770
Oryza brachyantha
OB07G24770
I
0.913
OLONG_002265
Oryza longistaminata
OLONG_002265
I
0.913
OMERI07G15720
Oryza meridionalis
OMERI07G15720
I
0.913
OPUNC07G17890
Oryza punctata
OPUNC07G17890
I
0.913
Bostr.10040s0089
Boechera stricta
Bostr.10040s0089
I
0.913
Cagra.2213s0001
Capsella grandiflora
Cagra.2213s0001
I
0.913
Carubv10021371m.g
Capsella rubella
Carubv10021371m.g
I
0.913
Bo01282s010
Brassica oleracea
Bo01282s010
I
0.912
Bra027101
Brassica rapa
Bra027101
I
0.912
POPTR_0004s03820
Populus trichocarpa
POPTR_0004s03820
I
0.912
Ciclev10008628m.g
Citrus clementina
Ciclev10008628m.g
I
0.912
gene30439-v1.0-hybrid
Fragaria vesca
gene30439-v1.0-hybrid
I
0.912
Lus10032657.g
Linum usitatissimum
Lus10032657.g
I
0.912
Lus10043095.g
Linum usitatissimum
Lus10043095.g
I
0.912
orange1.1g016791m.g
Citrus sinensis
orange1.1g016791m.g
I
0.912
GLYMA12G34990
Glycine max
GLYMA12G34990
I
0.910
GLYMA13G35560
Glycine max
GLYMA13G35560
I
0.910
LPERR07G16320
Leersia perrieri
LPERR07G16320
I
0.910
MTR_2g080010
Medicago truncatula
MTR_2g080010
I
0.910
POPTR_0001s41490
Populus trichocarpa
POPTR_0001s41490
I
0.910
TCM_031363
Theobroma cacao
TCM_031363
I
0.910
Ca_06901
Cicer arietinum
Ca_06901
I
0.910
27961.m000091
Ricinus communis
27961.m000091
I
0.910
cassava5169.m1
Manihot esculenta
cassava5169.m1
I
0.910
evm.TU.supercontig_80.94
Carica papaya
evm.TU.supercontig_80.94
I
0.910
Gorai.002G073800
Gossypium raimondii
Gorai.002G073800
I
0.910
Gorai.009G433100
Gossypium raimondii
Gorai.009G433100
I
0.910
SapurV1A.0127s0010
Salix purpurea
SapurV1A.0127s0010
I
0.910
SapurV1A.0299s0130
Salix purpurea
SapurV1A.0299s0130
I
0.910
SapurV1A.0746s0010
Salix purpurea
SapurV1A.0746s0010
I
0.910
SapurV1A.2174s0010
Salix purpurea
SapurV1A.2174s0010
I
0.910
Cla023771
Citrullus lanatus
Cla023771
I
0.909
Cucsa.341790
Cucumis sativus
Cucsa.341790
I
0.909
Gorai.013G167100
Gossypium raimondii
Gorai.013G167100
I
0.909
Thhalv10023591m.g
Eutrema salsugineum
Thhalv10023591m.g
I
0.909
MDP0000868419
Malus domestica
MDP0000868419
I
0.908
cassava42314.valid.m1
Manihot esculenta
cassava42314.valid.m1
I
0.907
Ciclev10015688m.g
Citrus clementina
Ciclev10015688m.g
I
0.907
Eucgr.F01091
Eucalyptus grandis
Eucgr.F01091
I
0.907
orange1.1g017854m.g
Citrus sinensis
orange1.1g017854m.g
I
0.907
Thhalv10012308m.g
Eutrema salsugineum
Thhalv10012308m.g
I
0.907
POPTR_0011s12420
Populus trichocarpa
POPTR_0011s12420
I
0.906
PRUPE_ppa007314mg
Prunus persica
PRUPE_ppa007314mg
I
0.906
Pm009955
Prunus mume
Pm009955
I
0.906
29851.m002359
Ricinus communis
29851.m002359
I
0.906
Aquca_059_00027
Aquilegia coerulea
Aquca_059_00027
I
0.906
evm.TU.supercontig_27.81
Carica papaya
evm.TU.supercontig_27.81
I
0.906
Gorai.009G170700
Gossypium raimondii
Gorai.009G170700
I
0.906
Cla011948
Citrullus lanatus
Cla011948
I
0.905
Cucsa.074600
Cucumis sativus
Cucsa.074600
I
0.905
Si032676m.g
Setaria italica
Si032676m.g
I
0.904
LjSGA_036741.1
Lotus japonicus
LjSGA_036741.1
I
0.904
AMTR_s00003p00252470
Amborella trichopoda
AMTR_s00003p00252470
I
0.902
GSMUA_Achr4G10310_001
Musa acuminata
GSMUA_Achr4G10310_001
I
0.902
TCM_029931
Theobroma cacao
TCM_029931
I
0.902
ONAC010
Oryza indica
BGIOSGA024071
I
0.900
OBART07G19010
Oryza barthii
OBART07G19010
I
0.900
OGLUM07G18780
Oryza glumaepatula
OGLUM07G18780
I
0.900
ONIVA07G17340
Oryza nivara
ONIVA07G17340
I
0.900
ORGLA07G0243600
Oryza glaberrima
ORGLA07G0243600
I
0.900
ORUFI07G19770
Oryza rufipogon
ORUFI07G19770
I
0.900
Ca_19654
Cicer arietinum
Ca_19654
I
0.900
Aquca_024_00081
Aquilegia coerulea
Aquca_024_00081
I
0.900
Bo6g030920
Brassica oleracea
Bo6g030920
I
0.899
Bra018997
Brassica rapa
Bra018997
I
0.899
GLYMA13G31660
Glycine max
GLYMA13G31660
I
0.899
SapurV1A.0044s0420
Salix purpurea
SapurV1A.0044s0420
I
0.899
GRMZM2G179885
Zea mays
GRMZM2G179885
I
0.898
ONAC010
Oryza sativa
OS07G0566500
I
0.898
Sb02g036620
Sorghum bicolor
Sb02g036620
I
0.898
Gorai.010G151400
Gossypium raimondii
Gorai.010G151400
I
0.898
AMTR_s00016p00196760
Amborella trichopoda
AMTR_s00016p00196760
N
0.897
mgf007362m
Mimulus guttatus
mgf007362m
I
0.897
mgf016382m
Mimulus guttatus
mgf016382m
I
0.897
Eucgr.B02485
Eucalyptus grandis
Eucgr.B02485
I
0.896
MDP0000120881
Malus domestica
MDP0000120881
I
0.896
PK19059.1
Cannabis sativa
PK19059.1
I
0.896
PGSC0003DMG400025031
Solanum tuberosum
PGSC0003DMG400025031
I
0.895
OB03G25680
Oryza brachyantha
OB03G25680
I
0.893
F775_02308
Aegilops tauschii
F775_02308
I
0.891
MLOC_65101
Hordeum vulgare
MLOC_65101
I
0.891
Traes_4AS_DBDA5E9C6
Triticum aestivum
Traes_4AS_DBDA5E9C6
I
0.891
Traes_4DL_F0BE36C9D
Triticum aestivum
Traes_4DL_F0BE36C9D
I
0.891
TRIUR3_29857
Triticum urartu
TRIUR3_29857
I
0.891
mgf025001m
Mimulus guttatus
mgf025001m
I
0.890
MDP0000173636
Malus domestica
MDP0000173636
I
0.890
Sb01g036560
Sorghum bicolor
Sb01g036560
I
0.889
Pavir.Ba00642
Panicum virgatum
Pavir.Ba00642
I
0.889
Pavir.J08552
Panicum virgatum
Pavir.J08552
I
0.889
GSMUA_Achr6G17720_001
Musa acuminata
GSMUA_Achr6G17720_001
I
0.888
GSMUA_Achr9G19520_001
Musa acuminata
GSMUA_Achr9G19520_001
I
0.888
Lus10006547.g
Linum usitatissimum
Lus10006547.g
I
0.888
LPERR03G13950
Leersia perrieri
LPERR03G13950
I
0.887
OPUNC03G15460
Oryza punctata
OPUNC03G15460
I
0.887
OBART03G15960
Oryza barthii
OBART03G15960
I
0.884
OGLUM03G16100
Oryza glumaepatula
OGLUM03G16100
I
0.884
OLONG_005610
Oryza longistaminata
OLONG_005610
I
0.884
OMERI03G14270
Oryza meridionalis
OMERI03G14270
I
0.884
ONIVA03G16920
Oryza nivara
ONIVA03G16920
I
0.884
ORGLA03G0152700
Oryza glaberrima
ORGLA03G0152700
I
0.884
ORUFI03G16510
Oryza rufipogon
ORUFI03G16510
I
0.884
Aquca_027_00052
Aquilegia coerulea
Aquca_027_00052
I
0.884
Cagra.27949s0001
Capsella grandiflora
Cagra.27949s0001
I
0.884
POPTR_0013s05080
Populus trichocarpa
POPTR_0013s05080
I
0.881
F775_14365
Aegilops tauschii
F775_14365
I
0.880
F775_16000
Aegilops tauschii
F775_16000
I
0.880
GLYMA15G07620
Glycine max
GLYMA15G07620
I
0.880
GRMZM2G011598
Zea mays
GRMZM2G011598
I
0.880
MLOC_8116
Hordeum vulgare
MLOC_8116
I
0.880
Traes_2AS_09457EDD8
Triticum aestivum
Traes_2AS_09457EDD8
I
0.880
Traes_2DS_5DF921ABB
Triticum aestivum
Traes_2DS_5DF921ABB
I
0.880
Traes_6AS_6F89CC969
Triticum aestivum
Traes_6AS_6F89CC969
I
0.880
Traes_6DS_90A627C3F
Triticum aestivum
Traes_6DS_90A627C3F
I
0.880
GSMUA_Achr10G04570_001
Musa acuminata
GSMUA_Achr10G04570_001
I
0.879
OS03G0327800
Oryza sativa
OS03G0327800
I
0.879
cassava26728.m1
Manihot esculenta
cassava26728.m1
I
0.879
Ca_12660
Cicer arietinum
Ca_12660
I
0.877
BRADI1G24390
Brachypodium distachyon
BRADI1G24390
I
0.876
BRADI1G63600
Brachypodium distachyon
BRADI1G63600
I
0.875
POPTR_0019s04690
Populus trichocarpa
POPTR_0019s04690
I
0.874
Traes_2BS_58AA829F4
Triticum aestivum
Traes_2BS_58AA829F4
I
0.874
TRAES3BF108700110CFD_g
Triticum aestivum
TRAES3BF108700110CFD_g
I
0.874
Ciclev10020717m.g
Citrus clementina
Ciclev10020717m.g
I
0.874
gene31150-v1.0-hybrid
Fragaria vesca
gene31150-v1.0-hybrid
I
0.874
orange1.1g017665m.g
Citrus sinensis
orange1.1g017665m.g
I
0.874
BGIOSGA022108
Oryza indica
BGIOSGA022108
I
0.872
GSMUA_Achr6G25380_001
Musa acuminata
GSMUA_Achr6G25380_001
I
0.872
OB06G10310
Oryza brachyantha
OB06G10310
I
0.872
OBART06G00240
Oryza barthii
OBART06G00240
I
0.872
OGLUM06G00210
Oryza glumaepatula
OGLUM06G00210
I
0.872
OMERI06G00230
Oryza meridionalis
OMERI06G00230
I
0.872
ONIVA06G00260
Oryza nivara
ONIVA06G00260
I
0.872
OPUNC06G00220
Oryza punctata
OPUNC06G00220
I
0.872
ORGLA06G0002300
Oryza glaberrima
ORGLA06G0002300
I
0.872
ORUFI06G00250
Oryza rufipogon
ORUFI06G00250
I
0.872
OS06G0104200
Oryza sativa
OS06G0104200
I
0.872
cassava35701.valid.m1
Manihot esculenta
cassava35701.valid.m1
I
0.872
Lus10003269.g
Linum usitatissimum
Lus10003269.g
I
0.872
GSMUA_Achr1G08860_001
Musa acuminata
GSMUA_Achr1G08860_001
I
0.871
Gorai.003G169000
Gossypium raimondii
Gorai.003G169000
I
0.871
Gorai.007G267900
Gossypium raimondii
Gorai.007G267900
I
0.871