Gorai.011G266100 (Gossypium raimondii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Gorai.011G266100 T287776_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.936
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.849 0.936
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.841 0.915
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.841 0.915
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.831 0.915
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G266100.1 Myb 567 617
Gorai.011G266100.2 Myb 423 473

Links

Other Myb/SANT family TFs
Other Gossypium raimondii TFs

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010672 Ailuropoda melanoleuca ENSAMEG00000010672 I
Alligator_sinensis_CCG021031.1 Alligator sinensis Alligator_sinensis_CCG021031.1 I
ENSAPLG00000011215 Anas platyrhynchos ENSAPLG00000011215 I
DEAF1 Anolis carolinensis ENSACAG00000015102 I
Afo_R011879 Aptenodytes forsteri Afo_R011879 I
ENSAMXG00000016516 Astyanax mexicanus ENSAMXG00000016516 I
DEAF1 Callithrix jacchus ENSCJAG00000011996 I
Aan_R010721 Calypte anna Aan_R010721 I
DEAF1 Canis familiaris ENSCAFG00000006569 I
DEAF1 Cavia porcellus ENSCPOG00000006073 I
ENSCSAG00000010763 Chlorocebus sabaeus ENSCSAG00000010763 I
deaf1 Danio rerio ENSDARG00000088844 I
DEAF1 Dasypus novemcinctus ENSDNOG00000000274 I
Deaf1 Dipodomys ordii ENSDORG00000015737 I
DEAF1 Equus caballus ENSECAG00000010151 I
DEAF1 Felis catus ENSFCAG00000007591 I
ENSFALG00000010923 Ficedula albicollis ENSFALG00000010923 I
ENSGMOG00000000222 Gadus morhua ENSGMOG00000000222 I
ENSGALG00000005089 Gallus gallus ENSGALG00000005089 I
deaf1 Gasterosteus aculeatus ENSGACG00000008942 I
Gfo_R011899 Geospiza fortis Gfo_R011899 I
DEAF1 Gorilla gorilla ENSGGOG00000014020 I
DEAF1 Homo sapiens ENSG00000177030 I
ENSSTOG00000004165 Ictidomys tridecemlineatus ENSSTOG00000004165 I
ENSLACG00000014207 Latimeria chalumnae ENSLACG00000014207 I
ENSLOCG00000002360 Lepisosteus oculatus ENSLOCG00000002360 I
DEAF1 Loxodonta africana ENSLAFG00000023242 I
DEAF1 Macaca mulatta ENSMMUG00000002660 I
ENSMEUG00000005016 Macropus eugenii ENSMEUG00000005016 I
DEAF1 Meleagris gallopavo ENSMGAG00000003765 I
ENSMPUG00000008992 Mustela putorius furo ENSMPUG00000008992 I
Deaf1 Mus musculus ENSMUSG00000058886 I
DEAF1 Myotis lucifugus ENSMLUG00000026576 I
ENSNLEG00000008479 Nomascus leucogenys ENSNLEG00000008479 I
ENSOPRG00000002240 Ochotona princeps ENSOPRG00000002240 I
Ogr05554 Ophisaurus gracilis Ogr05554 I
ENSONIG00000003936 Oreochromis niloticus ENSONIG00000003936 I
DEAF1 Otolemur garnettii ENSOGAG00000006434 I
ENSOARG00000006285 Ovis aries ENSOARG00000006285 I
DEAF1 Pan troglodytes ENSPTRG00000003129 D
ENSPANG00000008597 Papio anubis ENSPANG00000008597 I
ENSPMAG00000004264 Petromyzon marinus ENSPMAG00000004264 I
ENSPFOG00000014257 Poecilia formosa ENSPFOG00000014257 I
Pvit_08245 Pogona vitticeps Pvit_08245 I
DEAF1 Pteropus vampyrus ENSPVAG00000006883 I
Deaf1 Rattus norvegicus ENSRNOG00000017960 I
ENSSHAG00000002042 Sarcophilus harrisii ENSSHAG00000002042 I
DEAF1 Sus scrofa ENSSSCG00000012850 I
DEAF1 Taeniopygia guttata ENSTGUG00000007185 I
deaf1 Takifugu rubripes ENSTRUG00000002931 I
deaf1 Tetraodon nigroviridis ENSTNIG00000016068 I
ENSXMAG00000013352 Xiphophorus maculatus ENSXMAG00000013352 I