Lus10003277.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10003277.g T287873_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.679 0.764
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10003277 Myb 3 50
Lus10003277 Myb 56 97

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra010591 Brassica rapa Bra010591 I
Eucgr.I00906 Eucalyptus grandis Eucgr.I00906 I
Thhalv10017520m.g Eutrema salsugineum Thhalv10017520m.g N
GLYMA03G32747 Glycine max GLYMA03G32747 I
GLYMA06G22790 Glycine max GLYMA06G22790 N
GLYMA02G00981 Glycine max GLYMA02G00981 N
GLYMA01G32890 Glycine max GLYMA01G32890 I
MLOC_10815 Hordeum vulgare MLOC_10815 I
MLOC_49032 Hordeum vulgare MLOC_49032 N
MLOC_77331 Hordeum vulgare MLOC_77331 I
LPERR06G03910 Leersia perrieri LPERR06G03910 I
OBART06G04330 Oryza barthii OBART06G04330 I
OB03G34880 Oryza brachyantha OB03G34880 N
OB06G13990 Oryza brachyantha OB06G13990 I
ORGLA06G0039900 Oryza glaberrima ORGLA06G0039900 I
OGLUM06G04430 Oryza glumaepatula OGLUM06G04430 I
BGIOSGA022375 Oryza indica BGIOSGA022375 I
OLONG_008764 Oryza longistaminata OLONG_008764 N
OLONG_024366 Oryza longistaminata OLONG_024366 N
OMERI06G05430 Oryza meridionalis OMERI06G05430 I
OMERI10G14830 Oryza meridionalis OMERI10G14830 N
ONIVA06G05510 Oryza nivara ONIVA06G05510 I
ORUFI06G04330 Oryza rufipogon ORUFI06G04330 I
Pavir.J38250 Panicum virgatum Pavir.J38250 I
Pavir.J15575 Panicum virgatum Pavir.J15575 I
PGSC0003DMG400024523 Solanum tuberosum PGSC0003DMG400024523 N
Sb01g029220 Sorghum bicolor Sb01g029220 N
Sb10g004500 Sorghum bicolor Sb10g004500 I
Traes_5AL_85F3BE385 Triticum aestivum Traes_5AL_85F3BE385 N
Traes_7DS_0536E73E5 Triticum aestivum Traes_7DS_0536E73E5 I
Traes_7BS_F67ED5C9E Triticum aestivum Traes_7BS_F67ED5C9E I
Traes_6DL_C8198CD4A Triticum aestivum Traes_6DL_C8198CD4A N
Traes_6AL_842E10085 Triticum aestivum Traes_6AL_842E10085 N
Traes_5DL_C6C077BB9 Triticum aestivum Traes_5DL_C6C077BB9 N
GRMZM2G030744 Zea mays GRMZM2G030744 I
GRMZM2G017349 Zea mays GRMZM2G017349 I