Lus10025203.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10025203.g T288067_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRB2
M02314_2.00 		Arabidopsis thaliana
WRMCCTAR
YTAGGKYW		 PBM
Weirauch et al.(2014)
pTH7094 		0.733 0.787
TRB2
M01083_2.00 		Arabidopsis thaliana
HRMCCTAR
YTAGGKYD		 PBM
Sullivan et al.(2014)
pTH7260 		0.733 0.787
TRB2
M07157_2.00 		Arabidopsis thaliana
HHHHHNWWRCCCTAAWHHN
NDDWTTAGGGYWWNDDDDD		 Dap-seq
OMalley et al.(2016)
TBP3_col_a 		0.733 0.787
TRB2
M07158_2.00 		Arabidopsis thaliana
HVDHHHNWARCCCTAAHYH
DRDTTAGGGYTWNDDDHBD		 Dap-seq
OMalley et al.(2016)
TBP3_colamp_a 		0.733 0.787
PK06103.1
M02348_2.00 		Cannabis sativa
TGCCCTAG
CTAGGGCA		 PBM
Weirauch et al.(2014)
pTH9649 		0.688 0.787
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10025203 Myb 5 57

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG020716.1 Alligator sinensis Alligator_sinensis_CCG020716.1 N
ENSAPLG00000016290 Anas platyrhynchos ENSAPLG00000016290 N
Afo_R009710 Aptenodytes forsteri Afo_R009710 N
ENSAMXG00000005528 Astyanax mexicanus ENSAMXG00000005528 N
Aan_R010877 Calypte anna Aan_R010877 N
l3mbtl1b Danio rerio ENSDARG00000074346 N
ENSFALG00000001349 Ficedula albicollis ENSFALG00000001349 N
ENSGMOG00000015112 Gadus morhua ENSGMOG00000015112 N
ENSGALG00000001345 Gallus gallus ENSGALG00000001345 N
l3mbtl1b Gasterosteus aculeatus ENSGACG00000009206 N
Gfo_R008942 Geospiza fortis Gfo_R008942 N
ENSLACG00000008848 Latimeria chalumnae ENSLACG00000008848 N
ENSLOCG00000004154 Lepisosteus oculatus ENSLOCG00000004154 N
ENSLOCG00000004175 Lepisosteus oculatus ENSLOCG00000004175 N
ENSLOCG00000017277 Lepisosteus oculatus ENSLOCG00000017277 N
ENSMGAG00000002349 Meleagris gallopavo ENSMGAG00000002349 N
Ogr03652 Ophisaurus gracilis Ogr03652 N
ENSONIG00000006099 Oreochromis niloticus ENSONIG00000006099 N
l3mbtl1b Oryzias latipes ENSORLG00000009102 N
ENSPSIG00000008427 Pelodiscus sinensis ENSPSIG00000008427 N
ENSPFOG00000016946 Poecilia formosa ENSPFOG00000016946 N
Pvit_13740 Pogona vitticeps Pvit_13740 N
ENSTGUG00000000758 Taeniopygia guttata ENSTGUG00000000758 N
l3mbtl1b Takifugu rubripes ENSTRUG00000008264 N
Tal_R003526 Tyto alba Tal_R003526 N
l3mbtl3.S Xenopus laevis XB-GENE-1219139 N
l3mbtl3 Xenopus tropicalis XB-GENE-1219135 N
ENSXMAG00000013080 Xiphophorus maculatus ENSXMAG00000013080 N