CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ga01179
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ga01179
T289214_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga01179.1.p
Myb
14
61
KGPWTPEEDKVLVAHIQRFGHGNWRALPKQAGLLRCGKSCRLRWINYL
Pavir.Ga01179.1.p
Myb
67
112
RGNFSKEEEDAIIRLHDQLGNRYCCSPILASCLLFFPFSRIAAFLV
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10022991m.g
Citrus clementina
Ciclev10022991m.g
N
0.674
BGIOSGA014710
Oryza indica
BGIOSGA014710
N
0.757
29680.m001686
Ricinus communis
29680.m001686
N
0.661
VIT_14s0036g00460
Vitis vinifera
VIT_14s0036g00460
N
0.673