CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Gb01230
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Gb01230
T289232_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb01230.1.p
Myb
42
101
AETWVREETLCLIALRREMDAHFNTSKSNKHLWEAISARMRDQGFDRSPTMCTDKWRNVL
Pavir.Gb01230.2.p
Myb
42
101
AETWVREETLCLIALRREMDAHFNTSKSNKHLWEAISARMRDQGFDRSPTMCTDKWRNVL
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK23633.1
Cannabis sativa
PK23633.1
N
GLYMA02G31550
Glycine max
GLYMA02G31550
N
GLYMA10G17510
Glycine max
GLYMA10G17510
N
Gorai.006G137400
Gossypium raimondii
Gorai.006G137400
N
MDP0000305771
Malus domestica
MDP0000305771
N
MDP0000652898
Malus domestica
MDP0000652898
N