Thhalv10010581m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10010581m.g T290012_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.879 0.968
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.879 0.968
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.879 0.968
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.879 0.968
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.879 0.968
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.803 0.882
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.803 0.882
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.803 0.882
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.742 0.817
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.738 0.828
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.738 0.806
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.738 0.806
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10010581m Myb 6 52
Thhalv10010581m Myb 58 103

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
MYB114 Arabidopsis thaliana AT1G66380 I
Cagra.0463s0005 Capsella grandiflora Cagra.0463s0005 N
Eucgr.F02845 Eucalyptus grandis Eucgr.F02845 N
Eucgr.J01558 Eucalyptus grandis Eucgr.J01558 N
gene26513-v1.0-hybrid Fragaria vesca gene26513-v1.0-hybrid N
Lus10006541.g Linum usitatissimum Lus10006541.g N
Lus10000008.g Linum usitatissimum Lus10000008.g N
MDP0000317257 Malus domestica MDP0000317257 N
MDP0000215760 Malus domestica MDP0000215760 N
MDP0000127691 Malus domestica MDP0000127691 N
MTR_0023s0210 Medicago truncatula MTR_0023s0210 N
mgf022083m Mimulus guttatus mgf022083m N
Pm028470 Prunus mume Pm028470 N
Pm029444 Prunus mume Pm029444 N
Pm029437 Prunus mume Pm029437 N
SapurV1A.0230s0230 Salix purpurea SapurV1A.0230s0230 N
SapurV1A.0553s0120 Salix purpurea SapurV1A.0553s0120 N
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
PGSC0003DMG400013965 Solanum tuberosum PGSC0003DMG400013965 N
PGSC0003DMG400013966 Solanum tuberosum PGSC0003DMG400013966 N
VIT_02s0033g00370 Vitis vinifera VIT_02s0033g00370 N