CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EFA80160.1
(
Polysphondylium pallidum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
EFA80160.1
T290257_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mybZ
M02318_2.00
Dictyostelium discoideum
NNCCGVN
NBCGGNN
PBM
Weirauch et al.(2014)
pTH5410
0.739
0.848
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA80160.1
Myb
452
506
RKLWSQEECCQLLELVLKLDPQSFKSKESENRWRMIASELGRTVTSTRKKYMRLM
Links
Other
Myb/SANT
family TFs
Other
Polysphondylium pallidum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g00998
Acanthocheilonema viteae
nAv.1.0.1.g00998
N
ALUE_0001067601
Ascaris lumbricoides
ALUE_0001067601
N
ASU_05185
Ascaris suum
ASU_05185
N
Bm10445
Brugia malayi
Bm10445
N
BTMF_0000589101
Brugia timori
BTMF_0000589101
N
EEL_0000260001
Elaeophora elaphi
EEL_0000260001
N
EVEC_0001289301
Enterobius vermicularis
EVEC_0001289301
N
GPUH_0000267201
Gongylonema pulchrum
GPUH_0000267201
N
LOAG_02366
Loa loa
LOAG_02366
N
nOo.2.0.1.g10336
Onchocerca ochengi
nOo.2.0.1.g10336
N
WBGene00246796
Onchocerca volvulus
WBGene00246796
N
PEQ_0000927101
Parascaris equorum
PEQ_0000927101
N
TCLT_0000788101
Thelazia callipaeda
TCLT_0000788101
N
TCNE_0000976101
Toxocara canis
TCNE_0000976101
N
WUBG_09882
Wuchereria bancrofti
WUBG_09882
N