CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
EFA80160.1
(
Polysphondylium pallidum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
EFA80160.1
T290257_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mybZ
M02318_2.00
Dictyostelium discoideum
NNCCGVN
NBCGGNN
PBM
Weirauch et al.(2014)
pTH5410
0.739
0.848
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFA80160.1
Myb
452
506
RKLWSQEECCQLLELVLKLDPQSFKSKESENRWRMIASELGRTVTSTRKKYMRLM
Links
Other
Myb/SANT
family TFs
Other
Polysphondylium pallidum
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EFA77233.1
Polysphondylium pallidum
EFA77233.1
I
0.792
EFA76404.1
Polysphondylium pallidum
EFA76404.1
I
0.780
mybZ
Dictyostelium discoideum
DDB_G0284103
D
0.739