L898_g3444 (Steinernema monticolum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 L898_g3444 T291652_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.849 0.924
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.801 0.880
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.801 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g3444.t1 Myb 8 54
L898_g3444.t1 Myb 60 104

Links

Other Myb/SANT family TFs
Other Steinernema monticolum TFs

573 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I
Bo3g076180 Brassica oleracea Bo3g076180 I
Bra035746 Brassica rapa Bra035746 I
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I
Ca_10236 Cicer arietinum Ca_10236 I
Cla013874 Citrullus lanatus Cla013874 I
Cla011250 Citrullus lanatus Cla011250 I
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I
LPERR03G13760 Leersia perrieri LPERR03G13760 I
MTR_5g087790 Medicago truncatula MTR_5g087790 I
mgf012394m Mimulus guttatus mgf012394m I
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I
BGIOSGA023694 Oryza indica BGIOSGA023694 I
OLONG_004360 Oryza longistaminata OLONG_004360 I
OMERI05G02190 Oryza meridionalis OMERI05G02190 I
ONIVA07G26490 Oryza nivara ONIVA07G26490 I
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I
OS07G0685700 Oryza sativa OS07G0685700 I
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I
29708.m000185 Ricinus communis 29708.m000185 I
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I