Bo4g043670 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo4g043670 T292379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.881 0.667
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.881 0.667
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.881 0.667
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g043670.1 NAC/NAM 15 134

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac103 Arabidopsis lyrata fgenesh2_kg.8__2417__AT5G64060.1 I 0.000
anac103 Arabidopsis thaliana AT5G64060 D 0.000
Bostr.0568s0398 Boechera stricta Bostr.0568s0398 I 0.000
Bo3g101690 Brassica oleracea Bo3g101690 I 0.000
Bra024263 Brassica rapa Bra024263 I 0.000
Bra028640 Brassica rapa Bra028640 I 0.000
Carubv10026643m.g Capsella rubella Carubv10026643m.g I 0.000
Thhalv10004501m.g Eutrema salsugineum Thhalv10004501m.g I 0.000
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.000
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.000
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.000
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.000
cassava43226.valid.m1 Manihot esculenta cassava43226.valid.m1 N 0.000
cassava43227.valid.m1 Manihot esculenta cassava43227.valid.m1 N 0.000
30136.m001048 Ricinus communis 30136.m001048 N 0.000