Bo5g045190 (Brassica oleracea)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bo5g045190 T292404_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
JUB1
M07191_2.00 		Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR		 Dap-seq
OMalley et al.(2016)
ANAC042_col_a 		0.911 0.711
ANAC094
M07236_2.00 		Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR		 Dap-seq
OMalley et al.(2016)
ANAC094_col_a 		0.895 0.825
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g045190.1 NAC/NAM 17 143

Links

Other NAC/NAM family TFs
Other Brassica oleracea TFs

238 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32837 Aegilops tauschii F775_32837 N 0.000
BRADI2G24790 Brachypodium distachyon BRADI2G24790 N 0.000
Pavir.J02083 Panicum virgatum Pavir.J02083 N 0.000
Pavir.J07259 Panicum virgatum Pavir.J07259 N 0.000
Sb09g020880 Sorghum bicolor Sb09g020880 N 0.000
Traes_1AL_C4FA8404A Triticum aestivum Traes_1AL_C4FA8404A N 0.000
Traes_1BL_9018AA7BA Triticum aestivum Traes_1BL_9018AA7BA N 0.000
Traes_1DL_F410CF9FD Triticum aestivum Traes_1DL_F410CF9FD N 0.000
TRIUR3_22935 Triticum urartu TRIUR3_22935 N 0.000
GRMZM2G104400 Zea mays GRMZM2G104400 N 0.000
GRMZM2G456568 Zea mays GRMZM2G456568 N 0.000