Bra001366 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra001366 T292510_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANAC050
M07200_2.00 		Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a 		0.944 0.895
ANAC050
M07201_2.00 		Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG		 Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a 		0.944 0.895
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001366.1-P NAC/NAM 28 154

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FRS1 Arabidopsis thaliana AT4G19990 N
Bostr.30275s0471 Boechera stricta Bostr.30275s0471 N
Cagra.2564s0022 Capsella grandiflora Cagra.2564s0022 N
Carubv10004190m.g Capsella rubella Carubv10004190m.g N
Cucsa.134500 Cucumis sativus Cucsa.134500 N
Eucgr.D00033 Eucalyptus grandis Eucgr.D00033 N
gene19997-v1.0-hybrid Fragaria vesca gene19997-v1.0-hybrid N
Gorai.002G163900 Gossypium raimondii Gorai.002G163900 N
MDP0000236134 Malus domestica MDP0000236134 N
FRS1 Populus trichocarpa POPTR_0003s10970 N
SapurV1A.0325s0180 Salix purpurea SapurV1A.0325s0180 N
Solyc02g068550.1 Solanum lycopersicum Solyc02g068550.1 N
TCM_006022 Theobroma cacao TCM_006022 N
FRS1 Vitis vinifera VIT_01s0011g01470 N