CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra013034
(
Brassica rapa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Bra013034
T292581_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra013034.1-P
NAC/NAM
7
134
LPGFRFHPTEEELLNYYLKNMVYGNISKVEVIGFLNIYRHDPWDLPHLSTIGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRMIGLKKTLVFYSGRAPGGSKTDWVMNEFRM
Links
Other
NAC/NAM
family TFs
Other
Brassica rapa
TFs
41 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00018p00250840
Amborella trichopoda
AMTR_s00018p00250840
N
AMTR_s00040p00189460
Amborella trichopoda
AMTR_s00040p00189460
I
AMTR_s00065p00092420
Amborella trichopoda
AMTR_s00065p00092420
N
Aquca_006_00049
Aquilegia coerulea
Aquca_006_00049
N
Aquca_027_00414
Aquilegia coerulea
Aquca_027_00414
N
Aquca_037_00140
Aquilegia coerulea
Aquca_037_00140
N
Aquca_076_00011
Aquilegia coerulea
Aquca_076_00011
N
Aquca_122_00004
Aquilegia coerulea
Aquca_122_00004
N
AtGRF4
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001379
N
AtGRF3
Arabidopsis lyrata
fgenesh2_kg.4__1676__AT2G36400.1
N
GRF3
Arabidopsis thaliana
AT2G36400
N
GRF4
Arabidopsis thaliana
AT3G52910
N
Bostr.13129s0083
Boechera stricta
Bostr.13129s0083
N
Bostr.23794s0452
Boechera stricta
Bostr.23794s0452
N
BRADI3G51685
Brachypodium distachyon
BRADI3G51685
N
Bo4g186220
Brassica oleracea
Bo4g186220
N
Bra005268
Brassica rapa
Bra005268
N
Bra006956
Brassica rapa
Bra006956
N
Bra017240
Brassica rapa
Bra017240
N
Bra019640
Brassica rapa
Bra019640
N
Bra023066
Brassica rapa
Bra023066
N
PK16254.1
Cannabis sativa
PK16254.1
N
PK18842.1
Cannabis sativa
PK18842.1
N
Cagra.0228s0030
Capsella grandiflora
Cagra.0228s0030
N
Cagra.0612s0011
Capsella grandiflora
Cagra.0612s0011
N
Carubv10017366m.g
Capsella rubella
Carubv10017366m.g
N
Carubv10025172m.g
Capsella rubella
Carubv10025172m.g
N
evm.TU.supercontig_3.145
Carica papaya
evm.TU.supercontig_3.145
N
evm.TU.supercontig_5.63
Carica papaya
evm.TU.supercontig_5.63
N
Ca_00772
Cicer arietinum
Ca_00772
N
Ca_04035
Cicer arietinum
Ca_04035
N
Ca_09216
Cicer arietinum
Ca_09216
N
Cla017990
Citrullus lanatus
Cla017990
N
Cla022992
Citrullus lanatus
Cla022992
N
Ciclev10011856m.g
Citrus clementina
Ciclev10011856m.g
N
Ciclev10019828m.g
Citrus clementina
Ciclev10019828m.g
N
orange1.1g010979m.g
Citrus sinensis
orange1.1g010979m.g
N
Cucsa.378420
Cucumis sativus
Cucsa.378420
N
Cucsa.395430
Cucumis sativus
Cucsa.395430
N
Eucgr.A01534
Eucalyptus grandis
Eucgr.A01534
N
Eucgr.F00097
Eucalyptus grandis
Eucgr.F00097
N
Thhalv10016778m.g
Eutrema salsugineum
Thhalv10016778m.g
N
GLYMA03G35010
Glycine max
GLYMA03G35010
N
GLYMA04G40880
Glycine max
GLYMA04G40880
N
GLYMA06G13960
Glycine max
GLYMA06G13960
N
GLYMA10G07790
Glycine max
GLYMA10G07790
N
GLYMA13G21625
Glycine max
GLYMA13G21625
N
GLYMA14G10090
Glycine max
GLYMA14G10090
N
GLYMA14G10100
Glycine max
GLYMA14G10100
N
GLYMA17G35090
Glycine max
GLYMA17G35090
N
GLYMA17G35100
Glycine max
GLYMA17G35100
N
GLYMA19G37740
Glycine max
GLYMA19G37740
N
Gorai.005G098700
Gossypium raimondii
Gorai.005G098700
N
Gorai.009G222200
Gossypium raimondii
Gorai.009G222200
N
Gorai.009G277500
Gossypium raimondii
Gorai.009G277500
N
Gorai.009G406500
Gossypium raimondii
Gorai.009G406500
N
Gorai.010G027700
Gossypium raimondii
Gorai.010G027700
N
MLOC_80060
Hordeum vulgare
MLOC_80060
N
LPERR02G22680
Leersia perrieri
LPERR02G22680
N
LjSGA_011435.1
Lotus japonicus
LjSGA_011435.1
N
LjSGA_054039.1
Lotus japonicus
LjSGA_054039.1
N
MDP0000214734
Malus domestica
MDP0000214734
N
MDP0000808163
Malus domestica
MDP0000808163
N
cassava22415.valid.m1
Manihot esculenta
cassava22415.valid.m1
N
cassava32870.m1
Manihot esculenta
cassava32870.m1
N
cassava37892.valid.m1
Manihot esculenta
cassava37892.valid.m1
N
MTR_1g017490
Medicago truncatula
MTR_1g017490
N
MTR_7g104050
Medicago truncatula
MTR_7g104050
N
mgf001554m
Mimulus guttatus
mgf001554m
N
mgf002023m
Mimulus guttatus
mgf002023m
I
mgf026507m
Mimulus guttatus
mgf026507m
I
GSMUA_Achr10G06370_001
Musa acuminata
GSMUA_Achr10G06370_001
I
GSMUA_Achr11G21590_001
Musa acuminata
GSMUA_Achr11G21590_001
I
GSMUA_Achr2G04650_001
Musa acuminata
GSMUA_Achr2G04650_001
I
GSMUA_Achr3G22790_001
Musa acuminata
GSMUA_Achr3G22790_001
N
GSMUA_Achr5G20170_001
Musa acuminata
GSMUA_Achr5G20170_001
I
GSMUA_Achr8G07650_001
Musa acuminata
GSMUA_Achr8G07650_001
N
GSMUA_Achr8G12060_001
Musa acuminata
GSMUA_Achr8G12060_001
N
OBART02G27850
Oryza barthii
OBART02G27850
N
OBART04G22410
Oryza barthii
OBART04G22410
N
OB03G39940
Oryza brachyantha
OB03G39940
I
OB04G29390
Oryza brachyantha
OB04G29390
N
ORGLA02G0239200
Oryza glaberrima
ORGLA02G0239200
N
ORGLA04G0194300
Oryza glaberrima
ORGLA04G0194300
N
OGLUM02G28430
Oryza glumaepatula
OGLUM02G28430
N
OGLUM04G22390
Oryza glumaepatula
OGLUM04G22390
N
BGIOSGA008811
Oryza indica
BGIOSGA008811
N
BGIOSGA016961
Oryza indica
BGIOSGA016961
N
OLONG_025493
Oryza longistaminata
OLONG_025493
N
OMERI02G27040
Oryza meridionalis
OMERI02G27040
N
ONIVA02G30970
Oryza nivara
ONIVA02G30970
N
ONIVA04G21020
Oryza nivara
ONIVA04G21020
N
OPUNC02G25570
Oryza punctata
OPUNC02G25570
N
OPUNC04G20120
Oryza punctata
OPUNC04G20120
N
ORUFI02G29340
Oryza rufipogon
ORUFI02G29340
N
ORUFI04G24060
Oryza rufipogon
ORUFI04G24060
N
GRF10
Oryza sativa
OS02G0678800
N
GRF12
Oryza sativa
OS04G0574500
N
Pavir.Aa00919
Panicum virgatum
Pavir.Aa00919
I
Pavir.J06517
Panicum virgatum
Pavir.J06517
N
gw1.246.118.1
Physcomitrella patens
gw1.246.118.1
N
gw1.344.18.1
Physcomitrella patens
gw1.344.18.1
N
POPTR_0002s11590
Populus trichocarpa
POPTR_0002s11590
N
POPTR_0006s11630
Populus trichocarpa
POPTR_0006s11630
N
POPTR_0012s02950
Populus trichocarpa
POPTR_0012s02950
N
POPTR_0014s01320
Populus trichocarpa
POPTR_0014s01320
N
Pm026217
Prunus mume
Pm026217
N
PRUPE_ppa006912mg
Prunus persica
PRUPE_ppa006912mg
N
27496.m000094
Ricinus communis
27496.m000094
N
SapurV1A.0208s0190
Salix purpurea
SapurV1A.0208s0190
N
SapurV1A.0260s0250
Salix purpurea
SapurV1A.0260s0250
I
SapurV1A.0532s0070
Salix purpurea
SapurV1A.0532s0070
N
SapurV1A.0755s0030
Salix purpurea
SapurV1A.0755s0030
N
Si018252m.g
Setaria italica
Si018252m.g
N
Solyc04g077510.2
Solanum lycopersicum
Solyc04g077510.2
N
Solyc08g005430.2
Solanum lycopersicum
Solyc08g005430.2
I
Solyc09g009200.1
Solanum lycopersicum
Solyc09g009200.1
N
Solyc10g083510.1
Solanum lycopersicum
Solyc10g083510.1
N
PGSC0003DMG400004942
Solanum tuberosum
PGSC0003DMG400004942
N
PGSC0003DMG400018491
Solanum tuberosum
PGSC0003DMG400018491
I
PGSC0003DMG400028259
Solanum tuberosum
PGSC0003DMG400028259
N
Sb04g031890
Sorghum bicolor
Sb04g031890
N
TCM_022490
Theobroma cacao
TCM_022490
N
TCM_034655
Theobroma cacao
TCM_034655
N
VIT_08s0007g03760
Vitis vinifera
VIT_08s0007g03760
N
AtGRF7
Vitis vinifera
VIT_16s0098g01080
N
VIT_18s0001g08650
Vitis vinifera
VIT_18s0001g08650
N
GRMZM2G045977
Zea mays
GRMZM2G045977
N
GRMZM2G067743
Zea mays
GRMZM2G067743
I
GRMZM2G124566
Zea mays
GRMZM2G124566
N
GRMZM5G893117
Zea mays
GRMZM5G893117
I