CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_6g477900 *(Medicago truncatula)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	MTR_6g477900	T293795_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
anac057 M07208_2.00	Arabidopsis thaliana	TNCKTGHNNNDCAMGYH	DRCKTGHNNNDCAMGNA	Dap-seq OMalley et al.(2016) ANAC057_col_a	0.967	0.938
anac057 M07209_2.00	Arabidopsis thaliana	WNCKTGHNNHDCAMGYHAYCD	HGRTDRCKTGHDNNDCAMGNW	Dap-seq OMalley et al.(2016) ANAC057_colamp_a	0.967	0.938
PK26618.1 M01292_2.00	Cannabis sativa	NNYAMGHHA	TDDCKTRNN	PBM Lambert et al.(2019) pTH11328	0.959	0.839
PK19314.1 M01291_2.00	Cannabis sativa	NNNNAMDNHW	WDNHKTNNNN	PBM Lambert et al.(2019) pTH11252	0.953	0.786
anac028 M01289_2.00	Arabidopsis thaliana	NTTGCGTRH	DYACGCAAN	PBM Lambert et al.(2019) pTH9962	0.946	0.777
anac028 M07179_2.00	Arabidopsis thaliana	CTTSHNNHDCAMGYWA	TWRCKTGHDNNDSAAG	Dap-seq OMalley et al.(2016) ANAC028_col_a	0.946	0.777
ANAC020 M07178_2.00	Arabidopsis thaliana	TTNCKTGHNNNDCAMGYHAHY	RDTDRCKTGHNNNDCAMGNAA	Dap-seq OMalley et al.(2016) ANAC020_col_v31	0.936	0.750
NAC045 M07194_2.00	Arabidopsis thaliana	TTNCTTSHNNNDCAMG	CKTGHNNNDSAAGNAA	Dap-seq OMalley et al.(2016) ANAC045_col_a	0.925	0.786
NAC045 M07195_2.00	Arabidopsis thaliana	TTNCTTSHNNNDCAMG	CKTGHNNNDSAAGNAA	Dap-seq OMalley et al.(2016) ANAC045_colamp_a	0.925	0.786
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
KEH26851	NAC/NAM	7	133	PPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRKVSCQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRL

Links
Other NAC/NAM family TFs
Other *Medicago truncatula* TFs

216 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
OBART01G41560	Oryza barthii	OBART01G41560	N	0.000
OB01G50150	Oryza brachyantha	OB01G50150	N	0.000
ORGLA01G0355000	Oryza glaberrima	ORGLA01G0355000	N	0.000
OGLUM01G45730	Oryza glumaepatula	OGLUM01G45730	N	0.000
BGIOSGA000269	Oryza indica	BGIOSGA000269	N	0.000
OMERI01G38510	Oryza meridionalis	OMERI01G38510	N	0.000
ONIVA01G46660	Oryza nivara	ONIVA01G46660	N	0.000
OPUNC01G40380	Oryza punctata	OPUNC01G40380	N	0.000
ORUFI01G44910	Oryza rufipogon	ORUFI01G44910	N	0.000