OGLUM06G01950 (Oryza glumaepatula)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 OGLUM06G01950 T294156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.970 1.000
NAC043
M02370_2.00 		Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN		 PBM
Weirauch et al.(2014)
pTH8161 		0.928 0.895
NAC043
M07192_2.00 		Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA		 Dap-seq
OMalley et al.(2016)
NST1_colamp_a 		0.928 0.895
NAC043
M07193_2.00 		Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY		 Dap-seq
OMalley et al.(2016)
NST1_col_v31 		0.928 0.895
NAC066
M00978_2.00 		Arabidopsis thaliana
NBNNHNBNNN
NNNVNDNNVN		 PBM
Lindemose et al.(2014)
NST2 		0.920 0.833
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.919 0.904
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.916 0.886
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.908 0.842
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.908 0.842
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.873 0.798
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.873 0.798
NAC037
M07187_2.00 		Arabidopsis thaliana
CKTVNDNHNYAMG
CKTRNDNHNBAMG		 Dap-seq
OMalley et al.(2016)
VND1_col_a 		0.872 0.789
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM06G01950.1 NAC/NAM 12 139

Links

Other NAC/NAM family TFs
Other Oryza glumaepatula TFs

377 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAP00000021140-D1 Bos grunniens ENSBTAP00000021140-D1 N
ZNF354C Callithrix jacchus ENSCJAG00000018909 I
ZNF354C Gorilla gorilla ENSGGOG00000014245 I
ZNF354C Homo sapiens ENSG00000177932 D
ENSMMUP00000003342 Macaca fascicularis ENSMMUP00000003342 I
ZNF354C Macaca mulatta ENSMMUG00000002485 I
ENSNLEG00000001445 Nomascus leucogenys ENSNLEG00000001445 I
ZNF354C Otolemur garnettii ENSOGAG00000011077 I
ENSOARG00000004045 Ovis aries ENSOARG00000004045 N
ZNF354C Pan troglodytes ENSPTRG00000017613 I
ENSPANG00000002751 Papio anubis ENSPANG00000002751 I
ENSPPYG00000016117 Pongo abelii ENSPPYG00000016117 I
ZNF354C Procavia capensis ENSPCAG00000006966 I
ENSTSYG00000008898 Tarsius syrichta ENSTSYG00000008898 I
ZNF354C Tursiops truncatus ENSTTRG00000011571 I