CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0001s22630
(
Populus trichocarpa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
POPTR_0001s22630
T295206_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0001s22630.1
NAC/NAM
5
136
PLGYRFYPTEEELISFYLHNKLGGGRQERLQRVIPDISIYDIEPWDLPKLSGELCQGDTEQWFFFTPRQEREARGGRPNRTTASGYWKATGSPGYVYSSDNRVIGLKKTMVFYTGKAPRGRKTKWKMNEYRA
Links
Other
NAC/NAM
family TFs
Other
Populus trichocarpa
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015711
Ailuropoda melanoleuca
ENSAMEG00000015711
I
Alligator_sinensis_CCG004791.1
Alligator sinensis
Alligator_sinensis_CCG004791.1
I
PRDM6
Anolis carolinensis
ENSACAG00000003401
I
ENSAMXG00000012588
Astyanax mexicanus
ENSAMXG00000012588
I
ENSBTAP00000027421-D1
Bos grunniens
ENSBTAP00000027421-D1
I
PRDM6
Bos taurus
ENSBTAG00000020578
I
PRDM6
Callithrix jacchus
ENSCJAG00000017318
I
PRDM6
Canis familiaris
ENSCAFG00000023666
I
ENSCPOG00000004258
Cavia porcellus
ENSCPOG00000004258
I
ENSCSAG00000014599
Chlorocebus sabaeus
ENSCSAG00000014599
I
PRDM6
Choloepus hoffmanni
ENSCHOG00000003085
I
PRDM6
Dasypus novemcinctus
ENSDNOG00000006337
I
PRDM6
Equus caballus
ENSECAG00000004532
I
PRDM6
Erinaceus europaeus
ENSEEUG00000005543
I
PRDM6
Felis catus
ENSFCAG00000026249
I
ENSFALG00000007522
Ficedula albicollis
ENSFALG00000007522
I
PRDM6
Gallus gallus
ENSGALG00000005351
I
PRDM6
Homo sapiens
ENSG00000061455
D
ENSLOCG00000008663
Lepisosteus oculatus
ENSLOCG00000008663
I
PRDM6
Loxodonta africana
ENSLAFG00000000396
I
ENSP00000261364
Macaca fascicularis
ENSP00000261364
I
ENSMMUG00000010652
Macaca mulatta
ENSMMUG00000010652
I
ENSMEUG00000011470
Macropus eugenii
ENSMEUG00000011470
I
ENSMICG00000007754
Microcebus murinus
ENSMICG00000007754
I
PRDM6
Monodelphis domestica
ENSMODG00000013415
I
ENSMPUG00000012965
Mustela putorius furo
ENSMPUG00000012965
I
Prdm6
Mus musculus
ENSMUSG00000069378
I
Myotis_brandtii_PRDM6_10015768
Myotis brandtii
Myotis_brandtii_PRDM6_10015768
I
PRDM6
Myotis lucifugus
ENSMLUG00000010064
I
ENSNLEG00000012064
Nomascus leucogenys
ENSNLEG00000012064
I
PRDM6
Ochotona princeps
ENSOPRG00000004020
I
Ogr18847
Ophisaurus gracilis
Ogr18847
I
ENSONIG00000013818
Oreochromis niloticus
ENSONIG00000013818
I
ENSOANG00000001527
Ornithorhynchus anatinus
ENSOANG00000001527
I
PRDM6
Oryctolagus cuniculus
ENSOCUG00000003454
I
ENSORLG00000017089
Oryzias latipes
ENSORLG00000017089
I
ENSOARG00000018873
Ovis aries
ENSOARG00000018873
I
PRDM6
Pan troglodytes
ENSPTRG00000017180
I
ENSPANG00000020936
Papio anubis
ENSPANG00000020936
I
ENSPSIG00000007714
Pelodiscus sinensis
ENSPSIG00000007714
I
ENSPFOG00000000918
Poecilia formosa
ENSPFOG00000000918
I
Pvit_11059
Pogona vitticeps
Pvit_11059
I
PRDM6
Pteropus vampyrus
ENSPVAG00000006781
I
Prdm6
Rattus norvegicus
ENSRNOG00000030486
I
ENSSHAG00000009542
Sarcophilus harrisii
ENSSHAG00000009542
I
PRDM6
Sus scrofa
ENSSSCG00000014238
I
PRDM6
Takifugu rubripes
ENSTRUG00000011582
I
ENSTSYG00000009407
Tarsius syrichta
ENSTSYG00000009407
I
ENSTNIG00000004450
Tetraodon nigroviridis
ENSTNIG00000004450
I
PRDM6
Tupaia belangeri
ENSTBEG00000010088
I
prdm6
Xenopus tropicalis
XB-GENE-854907
I