CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si017641m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si017641m.g
T295728_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SMB
M07184_2.00
Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_col_a
0.934
0.860
SMB
M07185_2.00
Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA
Dap-seq
OMalley et al.(2016)
SMB_colamp_a
0.934
0.860
BRN2
M07217_2.00
Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG
Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a
0.917
0.772
BRN2
M07218_2.00
Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA
Dap-seq
OMalley et al.(2016)
ANAC070_col
0.917
0.772
MDP0000762302
M02383_2.00
Malus domestica
NNNAMKHNWN
NWNDMKTNNN
PBM
Weirauch et al.(2014)
pTH9205
0.908
0.816
NAC012
M00971_2.00
Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN
PBM
Lindemose et al.(2014)
SND1
0.901
0.789
OS06G0131700
M02378_2.00
Oryza sativa
NNNNHMDNND
HNNHKDNNNN
PBM
Weirauch et al.(2014)
pTH8356
0.897
0.798
NAC043
M02370_2.00
Arabidopsis thaliana
NTTACGYWAN
NTWRCGTAAN
PBM
Weirauch et al.(2014)
pTH8161
0.880
0.798
NAC043
M07192_2.00
Arabidopsis thaliana
TRCKTVHDNHNYAMG
CKTRNDNHDBAMGYA
Dap-seq
OMalley et al.(2016)
NST1_colamp_a
0.880
0.798
NAC043
M07193_2.00
Arabidopsis thaliana
RCKTVHDNHNYAMGYWA
TWRCKTRNDNHDBAMGY
Dap-seq
OMalley et al.(2016)
NST1_col_v31
0.880
0.798
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si017641m
NAC/NAM
11
140
PPGFRFHPTDEELLYYYLRKKVAYEPIDLDVIREIDLNKLEPWDLKDRCRIGTGPQDEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKAIFLSNGGRKVGLRKTLVFYTGRAPHGKKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
294 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB07871.1
Alternaria brassicicola
AB07871.1
I
MCYG_02108
Arthroderma otae
MCYG_02108
I
e_gw1.00609.122.1
Aspergillus carbonarius
e_gw1.00609.122.1
I
ACLA_048970
Aspergillus clavatus
CADACLAG00004962
I
CADAFLAG00004078
Aspergillus flavus
CADAFLAG00004078
I
CADAFLAG00001948
Aspergillus flavus
CADAFLAG00001948
I
AFUA_4G09710
Aspergillus fumigatus
CADAFUAG00008093
I
ANIA_01848
Aspergillus nidulans
CADANIAG00008499
D
CADANGAG00004451
Aspergillus niger
CADANGAG00004451
I
CADAORAG00001789
Aspergillus oryzae
CADAORAG00001789
I
EURHEDRAFT_407958
Aspergillus ruber
EURHEDRAFT_407958
I
ATEG_03734
Aspergillus terreus
CADATEAG00005983
I
ATEG_00770
Aspergillus terreus
CADATEAG00007541
I
BAUCODRAFT_39381
Baudoinia compniacensis
BAUCODRAFT_39381
N
A1O1_01225
Capronia coronata
A1O1_01225
I
A1O3_08807
Capronia epimyces
A1O3_08807
I
PV04_00230
Capronia semiimmersa
PV04_00230
I
Z519_04625
Cladophialophora bantiana
Z519_04625
I
G647_10121
Cladophialophora carrionii
G647_10121
I
A1O5_06113
Cladophialophora psammophila
A1O5_06113
I
A1O7_01699
Cladophialophora yegresii
A1O7_01699
I
CIMG_07923
Coccidioides immitis
CIMG_07923
I
CPC735_019860
Coccidioides posadasii
CPC735_019860
I
HMPREF1541_06468
Cyphellophora europaea
HMPREF1541_06468
I
DOTSEDRAFT_138917
Dothistroma septosporum
DOTSEDRAFT_138917
N
EPUS_03517
Endocarpon pusillum
EPUS_03517
I
A1O9_00139
Exophiala aquamarina
A1O9_00139
I
HMPREF1120_00298
Exophiala dermatitidis
HMPREF1120_00298
I
PV10_01961
Exophiala mesophila
PV10_01961
I
PV06_05595
Exophiala oligosperma
PV06_05595
I
PV11_09346
Exophiala sideris
PV11_09346
I
PV08_01386
Exophiala spinifera
PV08_01386
I
PV05_09886
Exophiala xenobiotica
PV05_09886
I
Z517_02285
Fonsecaea pedrosoi
Z517_02285
I
MPH_07854
Macrophomina phaseolina
MPH_07854
N
MCYG_02108
Microsporum canis
MCYG_02108
I
MGYG_03046
Microsporum gypseum
MGYG_03046
I
estExt_fgenesh1_pm.C_110020
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_110020
N
estExt_Genewise1Plus.C_chr_70131
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_70131
N
UCRNP2_4393
Neofusicoccum parvum
UCRNP2_4393
N
NFIA_106320
Neosartorya fischeri
CADNFIAG00009607
I
PDIP_71760
Penicillium digitatum
PDIP_71760
I
PITC_025970
Penicillium italicum
PITC_025970
I
PDE_05453
Penicillium oxalicum
PDE_05453
I
MYCFIDRAFT_72110
Pseudocercospora fijiensis
MYCFIDRAFT_72110
N
Z518_04968
Rhinocladiella mackenziei
Z518_04968
I
SEPMUDRAFT_151232
Sphaerulina musiva
SEPMUDRAFT_151232
N
TEQG_01149
Trichophyton equinum
TEQG_01149
I
H101_05391
Trichophyton interdigitale
H101_05391
I
H102_03533
Trichophyton rubrum
H102_03533
I
H105_03557
Trichophyton soudanense
H105_03557
I
TESG_07954
Trichophyton tonsurans
TESG_07954
I
TRV_02966
Trichophyton verrucosum
TRV_02966
I
GSTUM_00007307001
Tuber melanosporum
GSTUM_00007307001
N
UREG_02223
Uncinocarpus reesii
UREG_02223
I
PV09_07171
Verruconis gallopava
PV09_07171
I
Mycgr3G73671
Zymoseptoria tritici
Mycgr3G73671
N