CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si036447m.g
(
Setaria italica
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
Si036447m.g
T295796_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC094
M07236_2.00
Arabidopsis thaliana
YDCCGTNNNNNHNACGBH
DVCGTNDNNNNNACGGHR
Dap-seq
OMalley et al.(2016)
ANAC094_col_a
0.910
0.746
JUB1
M07191_2.00
Arabidopsis thaliana
YKCCGTNNNNNHNMCGBHRY
RYDVCGKNDNNNNNACGGMR
Dap-seq
OMalley et al.(2016)
ANAC042_col_a
0.898
0.763
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si036447m
NAC/NAM
36
164
LPGFRFHPTDEELVTFYLRRKVARKPLSIEIIKEMDIYKHDPWDLPKASTAGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSAANSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Setaria italica
TFs
286 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold525-EXSNAP2012.12
Pristionchus exspectatus
scaffold525-EXSNAP2012.12
N
scaffold525-EXSNAP2012.13
Pristionchus exspectatus
scaffold525-EXSNAP2012.13
N
scaffold525-EXSNAP2012.17
Pristionchus exspectatus
scaffold525-EXSNAP2012.17
N
scaffold608-EXSNAP2012.4
Pristionchus exspectatus
scaffold608-EXSNAP2012.4
N
PPA08387
Pristionchus pacificus
PPA08387
N