CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_18171
(
Cicer arietinum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Ca_18171
T296508_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.958
0.939
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_18171
NAC/NAM
1
126
MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Cicer arietinum
TFs
115 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G42570
Glycine max
GLYMA02G42570
I
Gorai.012G078100
Gossypium raimondii
Gorai.012G078100
I