CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Carubv10001357m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10001357m.g
T297452_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10001357m
NAC/NAM
22
147
FPGFKFSPTDVELISYYLKRKMDGLERSVEVIPDADIYNFEPWDLPDKSIVKSDSEWFFFCARGKKYPHGSQNRRATKMGYWKATGKERDVKSGSEVIGTKRTLVFHIGRAPKGERTDWIMHEYCM
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GB43084
Apis mellifera
GB43084
I
0.000
BGIBMGA006848
Bombyx mori
BGIBMGA006848
I
0.000
CGI_10017717
Crassostrea gigas
CGI_10017717
I
0.000
KGM_14572
Danaus plexippus
KGM_14572
I
0.000
DAPPUDRAFT_19853
Daphnia pulex
DAPPUDRAFT_19853
I
0.000
GF24025
Drosophila ananassae
FBgn0101019
N
0.000
GG14588
Drosophila erecta
FBgn0106844
N
0.000
GH14874
Drosophila grimshawi
FBgn0122349
N
0.000
CG12104
Drosophila melanogaster
FBgn0035238
N
0.000
GI12846
Drosophila mojavensis
FBgn0135603
N
0.000
GL20738
Drosophila persimilis
FBgn0158333
N
0.000
GA11397
Drosophila pseudoobscura
FBgn0071451
N
0.000
GM14202
Drosophila sechellia
FBgn0169128
N
0.000
GD17612
Drosophila simulans
FBgn0189162
N
0.000
GJ12991
Drosophila virilis
FBgn0200225
N
0.000
GK17179
Drosophila willistoni
FBgn0219178
N
0.000
ENSGMOG00000015161
Gadus morhua
ENSGMOG00000015161
I
0.000
HMEL005034
Heliconius melpomene
HMEL005034
I
0.000
ISCW015985
Ixodes scapularis
ISCW015985
N
0.000
LCUP006200
Lucilia cuprina
LCUP006200
N
0.000
MCINX005468
Melitaea cinxia
MCINX005468
I
0.000
MDOA008605
Musca domestica
MDOA008605
N
0.000
SPU_002060
Strongylocentrotus purpuratus
SPU_002060
N
0.000
TC012723
Tribolium castaneum
TC012723
I
0.000