CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GH14874
(
Drosophila grimshawi
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
FBgn0122349
T329617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0148780
Sox
101
169
PSKPLAPYALFFRDTMTAIKQQNPACTLEQITAIAHNMWESIDEKQKNVYDQRHELEKREYMRQVRDYQ
Links
Other
Sox
family TFs
Other
Drosophila grimshawi
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GJ12991
Drosophila virilis
FBgn0200225
N
0.725
GI12846
Drosophila mojavensis
FBgn0135603
N
0.660
GK17179
Drosophila willistoni
FBgn0219178
N
0.584
GM14202
Drosophila sechellia
FBgn0169128
N
0.516
GD17612
Drosophila simulans
FBgn0189162
N
0.516
GE20948
Drosophila yakuba
FBgn0238234
N
0.516
CG12104
Drosophila melanogaster
FBgn0035238
N
0.516
GG14588
Drosophila erecta
FBgn0106844
N
0.512
GF24025
Drosophila ananassae
FBgn0101019
N
0.489
GL20738
Drosophila persimilis
FBgn0158333
N
0.477
GA11397
Drosophila pseudoobscura
FBgn0071451
N
0.477
MDOA008605
Musca domestica
MDOA008605
N
0.463
GSPATT00032282001
Paramecium tetraurelia
GSPATT00032282001
N
0.460
LCUP006200
Lucilia cuprina
LCUP006200
N
0.460
ENSCSAVG00000001086
Ciona savignyi
ENSCSAVG00000001086
N
0.448
ENSGMOG00000013406
Gadus morhua
ENSGMOG00000013406
N
0.433
ENSONIG00000016627
Oreochromis niloticus
ENSONIG00000016627
N
0.427
XP_002936155
Xenopus tropicalis
XP_002936155
N
0.427
fgenesh2_pg.scaffold_19000069
Branchiostoma floridae
fgenesh2_pg.scaffold_19000069
N
0.427
fgenesh2_pg.scaffold_177000008
Branchiostoma floridae
fgenesh2_pg.scaffold_177000008
N
0.427
tox4b
Danio rerio
ENSDARG00000100163
I
0.424
tox4.S
Xenopus laevis
XB-GENE-993810
I
0.424
ENSMMUG00000014077
Macaca mulatta
ENSMMUG00000014077
N
0.424
ENSPFOG00000002336
Poecilia formosa
ENSPFOG00000002336
N
0.424
ENSSSCG00000023554
Sus scrofa
ENSSSCG00000023554
N
0.418
ENSPFOG00000008402
Poecilia formosa
ENSPFOG00000008402
N
0.418
ENSTGUG00000003811
Taeniopygia guttata
ENSTGUG00000003811
N
0.418
tox2
Oryzias latipes
ENSORLG00000004818
N
0.418
tox2
Tetraodon nigroviridis
ENSTNIG00000005683
N
0.418
ENSGGOG00000025016
Gorilla gorilla
ENSGGOG00000025016
I
0.418
tox2
Gasterosteus aculeatus
ENSGACG00000006914
N
0.418
ENSXMAG00000016763
Xiphophorus maculatus
ENSXMAG00000016763
N
0.418
tox2
Takifugu rubripes
ENSTRUG00000013848
N
0.418
ENSGMOG00000008081
Gadus morhua
ENSGMOG00000008081
N
0.418