Carubv10009727m.g (Capsella rubella)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Carubv10009727m.g T297491_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC005
M07163_2.00 		Arabidopsis thaliana
WWNCTTVYNHHNYAAGTWW
WWACTTRNDDNRBAAGNWW		 Dap-seq
OMalley et al.(2016)
ANAC005_col_a 		0.885 0.667
NAC004
M07161_2.00 		Arabidopsis thaliana
CTTVYNYNRYAAGY
RCTTRYNRNRBAAG		 Dap-seq
OMalley et al.(2016)
ANAC004_col_a 		0.882 0.586
NAC004
M07162_2.00 		Arabidopsis thaliana
WVCTTVYNBNRYAAGYWWBNN
NNVWWRCTTRYNVNRBAAGBW		 Dap-seq
OMalley et al.(2016)
ANAC004_colamp_a 		0.882 0.586
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10009727m NAC/NAM 9 138

Links

Other NAC/NAM family TFs
Other Capsella rubella TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI006067 Acyrthosiphon pisum ACYPI006067 N
AAEL002763 Aedes aegypti AAEL002763 N
AAEL004799 Aedes aegypti AAEL004799 N
AAEL015495 Aedes aegypti AAEL015495 N
AATE004258 Anopheles atroparvus AATE004258 N
AATE004381 Anopheles atroparvus AATE004381 N
ACOM042270 Anopheles coluzzii ACOM042270 N
ACUA022483 Anopheles culicifacies ACUA022483 N
ACUA027622 Anopheles culicifacies ACUA027622 N
AFAF002247 Anopheles farauti AFAF002247 N
AFAF016561 Anopheles farauti AFAF016561 N
AFUN003758 Anopheles funestus AFUN003758 N
AFUN003754 Anopheles funestus AFUN003754 N
AGAP002083 Anopheles gambiae AGAP002083 I
AGAP002082 Anopheles gambiae AGAP002082 N
AMAM007515 Anopheles maculatus AMAM007515 N
AMAM023802 Anopheles maculatus AMAM023802 N
AMEC016152 Anopheles melas AMEC016152 N
AMEC018985 Anopheles melas AMEC018985 N
AMEC019868 Anopheles melas AMEC019868 N
AMEM001627 Anopheles merus AMEM001627 N
AMEM000733 Anopheles merus AMEM000733 N
ASIS011627 Anopheles sinensis ASIS011627 N
ASIS002621 Anopheles sinensis ASIS002621 N
GB54118 Apis mellifera GB54118 N
ACEP11966 Atta cephalotes ACEP11966 N
Cflo_10706--XP_392003.1_APIME Camponotus floridanus Cflo_10706--XP_392003.1_APIME N
CLEC008150 Cimex lectularius CLEC008150 N
CpipJ_CPIJ020207 Culex pipiens CpipJ_CPIJ020207 N
CpipJ_CPIJ013161 Culex pipiens CpipJ_CPIJ013161 N
CPIJ020207 Culex quinquefasciatus CPIJ020207 N
CPIJ013161 Culex quinquefasciatus CPIJ013161 N
YQE_06536 Dendroctonus ponderosae YQE_06536 N
GF17309 Drosophila ananassae FBgn0094327 N
GH19280 Drosophila grimshawi FBgn0126746 N
rn Drosophila melanogaster FBgn0267337 D
GI23490 Drosophila mojavensis FBgn0146216 N
GA26220 Drosophila pseudoobscura FBgn0247595 I
GM10491 Drosophila sechellia FBgn0165439 N
GJ10241 Drosophila virilis FBgn0197528 N
GK11085 Drosophila willistoni FBgn0213096 N
LLOJ002296 Lutzomyia longipalpis LLOJ002296 N
MDOA008356 Musca domestica MDOA008356 N
NV18441 Nasonia vitripennis NV18441 N
RPRC000740 Rhodnius prolixus RPRC000740 N
SINV21632 Solenopsis invicta SINV21632 N
SMAR014468 Strigamia maritima SMAR014468 N
L798_13150 Zootermopsis nevadensis L798_13150 N