CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10011902m.g
(
Capsella rubella
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Carubv10011902m.g
T297500_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10011902m
NAC/NAM
1
122
MTLVDQYLRRRIDTGKEGFIKDIKLYEYEPWLLPHVNNDLFGEKEWFYFVKRTLKAGKTPNRKVLGRGGSIVGTWTTSGSKEAILGRNKVVIGHKAELSYYKDVKGQVKGDSTGWCMTEYWL
Links
Other
NAC/NAM
family TFs
Other
Capsella rubella
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AGL083W
Ashbya gossypii
AGOS_AGL083W
I
CLUG_04669
Candida lusitaniae
CLUG_04669
N
CLUG_04669
Clavispora lusitaniae
CLUG_04669
N
Ecym_7239
Eremothecium cymbalariae
Ecym_7239
I
KNAG_0A07100
Kazachstania naganishii
KNAG_0A07100
I
KLLA0_F25630g
Kluyveromyces lactis
KLLA0_F25630g
N
SAKL0A09856g
Lachancea kluyveri
SAKL0A09856g
I
SU7_2014
Saccharomyces arboricola
SU7_2014
I
666_YBR033W
Saccharomyces bayanus
666_YBR033W
N
14629_YKL038W
Saccharomyces bayanus
14629_YKL038W
I
RGT1
Saccharomyces cerevisiae
YKL038W
D
13522_YKL038W
Saccharomyces mikatae
13522_YKL038W
I
13626_YKL038W
Saccharomyces paradoxus
13626_YKL038W
I
AACERI_AaceriAGL083W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL083W
I
TPHA_0C04280
Tetrapisispora phaffii
TPHA_0C04280
I
TDEL_0B06360
Torulaspora delbrueckii
TDEL_0B06360
I
Kpol_1002p5
Vanderwaltozyma polyspora
Kpol_1002p5
I
ZBAI_03469
Zygosaccharomyces bailii
ZBAI_03469
I
ZYRO0E05676g
Zygosaccharomyces rouxii
ZYRO0E05676g
I