CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_67.60
(
Carica papaya
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
evm.TU.supercontig_67.60
T297887_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_67.60
NAC/NAM
17
127
LPGFRFHPTDDELVGFYLRRKVDKKPIRIELIKQIDIYKYDPWDLPKGSSVGDNESYFFCKRGRKYRNSIRPNRVTGSGFWKATGIDKPVYSNGGEGKGTKTDWMMHEFRL
Links
Other
NAC/NAM
family TFs
Other
Carica papaya
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_026_00367
Aquilegia coerulea
Aquca_026_00367
I
0.898
PK01104.1
Cannabis sativa
PK01104.1
I
0.871
Cla013684
Citrullus lanatus
Cla013684
I
0.881
Cla005599
Citrullus lanatus
Cla005599
I
0.873
Ciclev10005465m.g
Citrus clementina
Ciclev10005465m.g
I
0.896
Ciclev10006695m.g
Citrus clementina
Ciclev10006695m.g
I
0.896
Ciclev10032203m.g
Citrus clementina
Ciclev10032203m.g
I
0.892
orange1.1g046948m.g
Citrus sinensis
orange1.1g046948m.g
I
0.896
orange1.1g021785m.g
Citrus sinensis
orange1.1g021785m.g
I
0.892
GLYMA08G41995
Glycine max
GLYMA08G41995
I
0.876
GLYMA02G45371
Glycine max
GLYMA02G45371
I
0.882
GLYMA18G13574
Glycine max
GLYMA18G13574
I
0.887
GLYMA14G03441
Glycine max
GLYMA14G03441
I
0.889
Gorai.002G036700
Gossypium raimondii
Gorai.002G036700
I
0.874
Gorai.001G091900
Gossypium raimondii
Gorai.001G091900
I
0.893
Gorai.004G270400
Gossypium raimondii
Gorai.004G270400
I
0.880
Gorai.009G357700
Gossypium raimondii
Gorai.009G357700
I
0.873
chr2.LjT04L10.100.nc
Lotus japonicus
chr2.LjT04L10.100.nc
I
0.876
cassava34069.m1
Manihot esculenta
cassava34069.m1
I
0.892
cassava20477.m1
Manihot esculenta
cassava20477.m1
I
0.881
mgf023960m
Mimulus guttatus
mgf023960m
I
0.883
POPTR_0007s08340
Populus trichocarpa
POPTR_0007s08340
I
0.905
POPTR_0005s22710
Populus trichocarpa
POPTR_0005s22710
I
0.876
POPTR_0002s05820
Populus trichocarpa
POPTR_0002s05820
I
0.874
PRUPE_ppa022043mg
Prunus persica
PRUPE_ppa022043mg
I
0.879
30169.m006343
Ricinus communis
30169.m006343
I
0.899
SapurV1A.0085s0430
Salix purpurea
SapurV1A.0085s0430
I
0.891
SapurV1A.0354s0230
Salix purpurea
SapurV1A.0354s0230
I
0.889
VIT_19s0027g00880
Vitis vinifera
VIT_19s0027g00880
I
0.879
VIT_19s0027g00870
Vitis vinifera
VIT_19s0027g00870
I
0.913
VIT_19s0027g00860
Vitis vinifera
VIT_19s0027g00860
I
0.894
anac042
Vitis vinifera
VIT_12s0028g00860
I
0.895