Gorai.004G267300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.004G267300 T298071_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRN2
M07217_2.00 		Arabidopsis thaliana
CKTVHDNNNYAMGYWA
TWRCKTRNNNHDBAMG		 Dap-seq
OMalley et al.(2016)
ANAC070_colamp_a 		0.971 0.921
BRN2
M07218_2.00 		Arabidopsis thaliana
TWDCKTVHDNHDYAMGYWAHH
DDTWRCKTRHDNHDBAMGHWA		 Dap-seq
OMalley et al.(2016)
ANAC070_col 		0.971 0.921
SMB
M07184_2.00 		Arabidopsis thaliana
TWNCKTVHDNHNYAMGYWAYH
DRTWRCKTRNDNHDBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_col_a 		0.924 0.825
SMB
M07185_2.00 		Arabidopsis thaliana
TWNCKTVNNNNNYAMG
CKTRNNNNNBAMGNWA		 Dap-seq
OMalley et al.(2016)
SMB_colamp_a 		0.924 0.825
MDP0000762302
M02383_2.00 		Malus domestica
NNNAMKHNWN
NWNDMKTNNN		 PBM
Weirauch et al.(2014)
pTH9205 		0.914 0.789
NAC012
M00971_2.00 		Arabidopsis thaliana
NYAMGYHANN
NNTDRCKTRN		 PBM
Lindemose et al.(2014)
SND1 		0.900 0.789
OS06G0131700
M02378_2.00 		Oryza sativa
NNNNHMDNND
HNNHKDNNNN		 PBM
Weirauch et al.(2014)
pTH8356 		0.871 0.781
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G267300.1 NAC/NAM 9 136

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB06937.1 Alternaria brassicicola AB06937.1 N
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I
aug1.126_g21700 Bigelowiella natans aug1.126_g21700 N
COCC4DRAFT_59869 Bipolaris maydis COCC4DRAFT_59869 N
COCMIDRAFT_6607 Bipolaris oryzae COCMIDRAFT_6607 N
COCSADRAFT_342303 Bipolaris sorokiniana COCSADRAFT_342303 N
COCVIDRAFT_22007 Bipolaris victoriae COCVIDRAFT_22007 N
COCCADRAFT_2680 Bipolaris zeicola COCCADRAFT_2680 N
Bcin01g08840 Botrytis cinerea Bcin01g08840 I
PVAR5_2976 Byssochlamys spectabilis PVAR5_2976 N
estExt_fgenesh1_pg.C_150217 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_150217 N
W97_04667 Coniosporium apollinis W97_04667 N
DRE_06603 Drechslerella stenobrocha DRE_06603 I
LEMA_P000900.1 Leptosphaeria maculans LEMA_P000900.1 N
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I
MVLG_01270 Microbotryum violaceum MVLG_01270 I
estExt_fgeneshMC_pg.C_20910 Mucor circinelloides estExt_fgeneshMC_pg.C_20910 I
UCRNP2_5474 Neofusicoccum parvum UCRNP2_5474 N
PABG_05916 Paracoccidioides brasiliensis PABG_05916 N
PAAG_05470 Paracoccidioides sp lutzii PAAG_05470 N
gw1.72.30.1 Phycomyces blakesleeanus gw1.72.30.1 I
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I
V499_08602 Pseudogymnoascus pannorum V499_08602 I
PTT_13179 Pyrenophora teres PTT_13179 N
PTRG_02598 Pyrenophora triticirepentis PTRG_02598 N
RO3G_07543 Rhizopus oryzae RO3G_07543 I
RO3G_07013 Rhizopus oryzae RO3G_07013 I
RO3G_09728 Rhizopus oryzae RO3G_09728 I
RO3G_15755 Rhizopus oryzae RO3G_15755 I
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I
SETTUDRAFT_168734 Setosphaeria turcica SETTUDRAFT_168734 N
SNOG_01716 Stagonospora nodorum SNOG_01716 N
PV09_06039 Verruconis gallopava PV09_06039 N