Gorai.005G195300 (Gossypium raimondii)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Gorai.005G195300 T298087_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC083
M02374_2.00 		Arabidopsis thaliana
WYACGYAANN
NNTTRCGTRW		 PBM
Weirauch et al.(2014)
pTH7308 		0.928 0.833
NAC083
M07230_2.00 		Arabidopsis thaliana
TRCKTRWNNNDYAMG
CKTRHNNNWYAMGYA		 Dap-seq
OMalley et al.(2016)
ANAC083_colamp_a 		0.928 0.833
NAC083
M07231_2.00 		Arabidopsis thaliana
TTNCKTRWNNHDYACGYWA
TWRCGTRHDNNWYAMGNAA		 Dap-seq
OMalley et al.(2016)
ANAC083_col_v3a 		0.928 0.833
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.005G195300.1 NAC/NAM 16 139

Links

Other NAC/NAM family TFs
Other Gossypium raimondii TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N
LBD21 Arabidopsis thaliana AT3G11090 N
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N
Bo5g136860 Brassica oleracea Bo5g136860 N
Bra034867 Brassica rapa Bra034867 N
PK29334.1 Cannabis sativa PK29334.1 I
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N
Ca_12464 Cicer arietinum Ca_12464 N
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N
Cucsa.136740 Cucumis sativus Cucsa.136740 N
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N
GLYMA11G35500 Glycine max GLYMA11G35500 N
GLYMA14G06270 Glycine max GLYMA14G06270 N
GLYMA18G02910 Glycine max GLYMA18G02910 N
GLYMA02G43220 Glycine max GLYMA02G43220 N
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N
Lus10028986.g Linum usitatissimum Lus10028986.g N
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N
LjSGA_139647.1 Lotus japonicus LjSGA_139647.1 N
MDP0000943252 Malus domestica MDP0000943252 N
MDP0000220708 Malus domestica MDP0000220708 N
cassava41267.m1 Manihot esculenta cassava41267.m1 N
cassava20837.m1 Manihot esculenta cassava20837.m1 N
MTR_5g083010 Medicago truncatula MTR_5g083010 N
MTR_3g071420 Medicago truncatula MTR_3g071420 N
mgf019866m Mimulus guttatus mgf019866m N
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N
Pm018957 Prunus mume Pm018957 N
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N
29814.m000742 Ricinus communis 29814.m000742 N
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N
TCM_042466 Theobroma cacao TCM_042466 N
LBD21 Vitis vinifera VIT_13s0067g01450 N