MDP0000943252 (Malus domestica)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 MDP0000943252 T247146_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000943252 LOB 12 110

Links

Other LOB family TFs
Other Malus domestica TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000220708 Malus domestica MDP0000220708 N 0.929
PK29334.1 Cannabis sativa PK29334.1 I 0.922
PRUPE_ppa012284mg Prunus persica PRUPE_ppa012284mg N 0.899
Ciclev10032862m.g Citrus clementina Ciclev10032862m.g N 0.889
Pm018957 Prunus mume Pm018957 N 0.889
Gorai.011G291500 Gossypium raimondii Gorai.011G291500 N 0.889
orange1.1g036565m.g Citrus sinensis orange1.1g036565m.g N 0.889
Gorai.013G016900 Gossypium raimondii Gorai.013G016900 N 0.889
evm.TU.supercontig_19.151 Carica papaya evm.TU.supercontig_19.151 N 0.879
LBD21 Vitis vinifera VIT_13s0067g01450 N 0.869
cassava41267.m1 Manihot esculenta cassava41267.m1 N 0.869
cassava20837.m1 Manihot esculenta cassava20837.m1 N 0.869
Eucgr.G03078 Eucalyptus grandis Eucgr.G03078 N 0.859
POPTR_0010s19340 Populus trichocarpa POPTR_0010s19340 N 0.859
TCM_042466 Theobroma cacao TCM_042466 N 0.859
Lus10028986.g Linum usitatissimum Lus10028986.g N 0.859
POPTR_0008s07150 Populus trichocarpa POPTR_0008s07150 N 0.848
GLYMA18G02910 Glycine max GLYMA18G02910 N 0.838
GLYMA14G06270 Glycine max GLYMA14G06270 N 0.838
SapurV1A.0061s0510 Salix purpurea SapurV1A.0061s0510 N 0.838
GLYMA02G43220 Glycine max GLYMA02G43220 N 0.838
gene21008-v1.0-hybrid Fragaria vesca gene21008-v1.0-hybrid N 0.838
29814.m000742 Ricinus communis 29814.m000742 N 0.838
GLYMA11G35500 Glycine max GLYMA11G35500 N 0.828
Cucsa.136740 Cucumis sativus Cucsa.136740 N 0.828
MTR_3g071420 Medicago truncatula MTR_3g071420 N 0.828
SapurV1A.0650s0120 Salix purpurea SapurV1A.0650s0120 N 0.828
MTR_5g083010 Medicago truncatula MTR_5g083010 N 0.818
PGSC0003DMG400027718 Solanum tuberosum PGSC0003DMG400027718 N 0.808
Solyc03g095940.1 Solanum lycopersicum Solyc03g095940.1 N 0.808
Ca_12464 Cicer arietinum Ca_12464 N 0.808
chr6.LjB02K20.190.nd Lotus japonicus chr6.LjB02K20.190.nd N 0.798
Thhalv10021674m.g Eutrema salsugineum Thhalv10021674m.g N 0.788
LBD21 Arabidopsis lyrata fgenesh2_kg.3__1152__AT3G11090.1 N 0.788
Carubv10015898m.g Capsella rubella Carubv10015898m.g N 0.788
LBD21 Arabidopsis thaliana AT3G11090 N 0.788
mgf019866m Mimulus guttatus mgf019866m N 0.788
Bostr.19424s1045 Boechera stricta Bostr.19424s1045 N 0.788
Cagra.1655s0059 Capsella grandiflora Cagra.1655s0059 N 0.788
Bo5g136860 Brassica oleracea Bo5g136860 N 0.758
Bra034867 Brassica rapa Bra034867 N 0.758