CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Gorai.013G063500
(
Gossypium raimondii
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Gorai.013G063500
T298178_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G063500.1
NAC/NAM
11
133
PPGFRFHPTDEELVVHFLQRKAALLPCHPDVIPDLHLYPYDPWELDGKALGEGKQWYYYSRRSENRNTRNGYWKAMGMEESVVNRSSSRRVGIKKYLVFFIGEAEEGGGGGVKTDWIMHEYRL
Gorai.013G063500.2
NAC/NAM
11
133
PPGFRFHPTDEELVVHFLQRKAALLPCHPDVIPDLHLYPYDPWELDGKALGEGKQWYYYSRRSENRNTRNGYWKAMGMEESVVNRSSSRRVGIKKYLVFFIGEAEEGGGGGVKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Gossypium raimondii
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00616
Aegilops tauschii
F775_00616
N
scaffold_603773.1
Arabidopsis lyrata
scaffold_603773.1
N
Bra011042
Brassica rapa
Bra011042
N
Bra034737
Brassica rapa
Bra034737
N
Carubv10012777m.g
Capsella rubella
Carubv10012777m.g
N
evm.TU.supercontig_817.1
Carica papaya
evm.TU.supercontig_817.1
N
Cla005572
Citrullus lanatus
Cla005572
N
orange1.1g038008m.g
Citrus sinensis
orange1.1g038008m.g
N
Gorai.003G021300
Gossypium raimondii
Gorai.003G021300
I
MLOC_63597
Hordeum vulgare
MLOC_63597
I
LjSGA_102149.2
Lotus japonicus
LjSGA_102149.2
N
GSMUA_Achr6G20070_001
Musa acuminata
GSMUA_Achr6G20070_001
N
OBART02G37080
Oryza barthii
OBART02G37080
N
OGLUM08G12590
Oryza glumaepatula
OGLUM08G12590
I
BGIOSGA028509
Oryza indica
BGIOSGA028509
N
OLONG_004751
Oryza longistaminata
OLONG_004751
N
OMERI02G34900
Oryza meridionalis
OMERI02G34900
N
OPUNC02G34240
Oryza punctata
OPUNC02G34240
N
OPUNC08G10730
Oryza punctata
OPUNC08G10730
N
OS08G0346400
Oryza sativa
OS08G0346400
I
Pavir.Ba02286
Panicum virgatum
Pavir.Ba02286
N
Pavir.Aa00126
Panicum virgatum
Pavir.Aa00126
N
PDK_20s1744641g001
Phoenix dactylifera
PDK_20s1744641g001
N
e_gw1.141.94.1
Physcomitrella patens
e_gw1.141.94.1
N
PRUPE_ppa007491m2g
Prunus persica
PRUPE_ppa007491m2g
N
30005.m001245
Ricinus communis
30005.m001245
N
PGSC0003DMG400009304
Solanum tuberosum
PGSC0003DMG400009304
I
PGSC0003DMG400007401
Solanum tuberosum
PGSC0003DMG400007401
I
Sb04g036955
Sorghum bicolor
Sb04g036955
N
GRMZM2G162409
Zea mays
GRMZM2G162409
I