CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Db01755
(
Panicum virgatum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02365 (NAM)
IPR003441
Pavir.Db01755
T298813_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Db01755.1.p
NAC/NAM
5
100
PACFVFAPEDEVAVEYYLLPRLLGWQPQIDGLILEDDPLSAPPWELLERNGRKEEAFFLAEGQARCGKGTRQKRTCAGGGWWEGQKTCAEGKGLRV
Pavir.Db01755.1.p
NAC/NAM
107
233
TEADGDVVDQYLLRRILGQPLPLDGLILDDDPLSAPPWELLERNGCKDDAFFFALGQARSGKGSRQKRTCAGGGFWNGERTCVDGEKLRVPGPGGAGVEVAWRKKALSFQEGGEKGSTGWVMHEYAI
Links
Other
NAC/NAM
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PBANKA_021440
Plasmodium berghei
PBANKA_021440
I
PCHAS_021280
Plasmodium chabaudi
PCHAS_021280
I
PF07_0126
Plasmodium falciparum
PF07_0126
D
PVX_081810
Plasmodium vivax
PVX_081810
I
PY01583
Plasmodium yoelii
PY01583
I