CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PBANKA_021440
(
Plasmodium berghei
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PBANKA_021440
T004255_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PF07_0126
M00566_2.00
Plasmodium falciparum
BGGAAAWT
AWTTTCCV
PBM
Campbell et al.(2010)
PF07_0126_DLD
0.835
0.903
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_021440:pep
AP2
945
998
TRVGGVCFDKNRQRWIAHWKIDGKYHKHYFPISQYGFENARERAINCRKQAEKL
PBANKA_021440:pep
AP2
1028
1076
PRCEGVAYDEMSQSWVSTFVVHKKFSIDELGFYEARDRAIYCRRTFEKI
Links
Other
AP2
family TFs
Other
Plasmodium berghei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PY01583
Plasmodium yoelii
PY01583
I
0.873
PCHAS_021280
Plasmodium chabaudi
PCHAS_021280
I
0.870
PKH_021500
Plasmodium knowlesi
PKH_021500
I
0.838
PF07_0126
Plasmodium falciparum
PF07_0126
D
0.835
PVX_081810
Plasmodium vivax
PVX_081810
I
0.805