Pavir.J20890 (Panicum virgatum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Pavir.J20890 T298978_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J20890.1.p NAC/NAM 14 157
Pavir.J20890.2.p NAC/NAM 14 157
Pavir.J20890.3.p NAC/NAM 14 157

Links

Other NAC/NAM family TFs
Other Panicum virgatum TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00942 Aegilops tauschii F775_00942 N 0.953
F775_07224 Aegilops tauschii F775_07224 I 0.899
F775_12735 Aegilops tauschii F775_12735 N 0.945
F775_16517 Aegilops tauschii F775_16517 N 0.945
F775_52611 Aegilops tauschii F775_52611 N 0.936
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I 0.899
BRADI3G13117 Brachypodium distachyon BRADI3G13117 N 0.917
BRADI5G27467 Brachypodium distachyon BRADI5G27467 N 0.945
MLOC_19933 Hordeum vulgare MLOC_19933 N 0.957
MLOC_67250 Hordeum vulgare MLOC_67250 N 0.939
MLOC_66083 Hordeum vulgare MLOC_66083 N 0.942
MLOC_53086 Hordeum vulgare MLOC_53086 I 0.899
LPERR08G00380 Leersia perrieri LPERR08G00380 N 0.934
LPERR06G00240 Leersia perrieri LPERR06G00240 I 0.884
LPERR04G16200 Leersia perrieri LPERR04G16200 I 0.879
GSMUA_Achr3G22360_001 Musa acuminata GSMUA_Achr3G22360_001 N 0.904
GSMUA_Achr8G11590_001 Musa acuminata GSMUA_Achr8G11590_001 I 0.873
OBART08G00290 Oryza barthii OBART08G00290 N 0.915
OBART06G00240 Oryza barthii OBART06G00240 I 0.874
OBART04G20020 Oryza barthii OBART04G20020 I 0.879
OB04G27030 Oryza brachyantha OB04G27030 I 0.879
OB06G10310 Oryza brachyantha OB06G10310 I 0.874
OB08G10370 Oryza brachyantha OB08G10370 N 0.929
ORGLA04G0171200 Oryza glaberrima ORGLA04G0171200 I 0.879
ORGLA04G0270600 Oryza glaberrima ORGLA04G0270600 I 0.876
ORGLA06G0002300 Oryza glaberrima ORGLA06G0002300 I 0.874
OGLUM04G19900 Oryza glumaepatula OGLUM04G19900 I 0.879
OGLUM04G30580 Oryza glumaepatula OGLUM04G30580 I 0.876
OGLUM06G00210 Oryza glumaepatula OGLUM06G00210 I 0.874
OGLUM08G00350 Oryza glumaepatula OGLUM08G00350 N 0.927
BGIOSGA014034 Oryza indica BGIOSGA014034 I 0.876
BGIOSGA027807 Oryza indica BGIOSGA027807 N 0.915
BGIOSGA022108 Oryza indica BGIOSGA022108 I 0.874
BGIOSGA014649 Oryza indica BGIOSGA014649 I 0.879
OMERI03G30800 Oryza meridionalis OMERI03G30800 I 0.879
OMERI04G25730 Oryza meridionalis OMERI04G25730 I 0.885
OMERI06G00230 Oryza meridionalis OMERI06G00230 I 0.874
OMERI08G00600 Oryza meridionalis OMERI08G00600 N 0.934
ONIVA08G00280 Oryza nivara ONIVA08G00280 N 0.915
ONIVA04G18230 Oryza nivara ONIVA04G18230 I 0.879
ONIVA04G29890 Oryza nivara ONIVA04G29890 I 0.876
ONIVA06G00260 Oryza nivara ONIVA06G00260 I 0.874
OPUNC06G00220 Oryza punctata OPUNC06G00220 I 0.874
OPUNC08G00360 Oryza punctata OPUNC08G00360 N 0.929
OPUNC04G17680 Oryza punctata OPUNC04G17680 I 0.879
ORUFI08G00330 Oryza rufipogon ORUFI08G00330 N 0.927
ORUFI06G00250 Oryza rufipogon ORUFI06G00250 I 0.874
ORUFI04G21580 Oryza rufipogon ORUFI04G21580 I 0.879
ORUFI04G32410 Oryza rufipogon ORUFI04G32410 I 0.876
OS08G0103900 Oryza sativa OS08G0103900 N 0.929
OS06G0104200 Oryza sativa OS06G0104200 I 0.874
OS04G0691300 Oryza sativa OS04G0691300 I 0.876
OS04G0536500 Oryza sativa OS04G0536500 I 0.879
Pavir.J31179 Panicum virgatum Pavir.J31179 N 0.972
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I 0.894
Pavir.Gb00744 Panicum virgatum Pavir.Gb00744 I 0.877
Pavir.J07126 Panicum virgatum Pavir.J07126 I 0.877
Pavir.J26987 Panicum virgatum Pavir.J26987 I 0.894
e_gw1.70.85.1 Physcomitrella patens e_gw1.70.85.1 N 0.895
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I 0.910
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I 0.910
Si014149m.g Setaria italica Si014149m.g N 0.962
Si010504m.g Setaria italica Si010504m.g I 0.877
Si006829m.g Setaria italica Si006829m.g I 0.889
Sb06g023780 Sorghum bicolor Sb06g023780 I 0.871
Sb10g000460 Sorghum bicolor Sb10g000460 I 0.894
Sb07g000470 Sorghum bicolor Sb07g000470 N 0.960
Sb06g034010 Sorghum bicolor Sb06g034010 N 0.945
Traes_2AL_8EE7F34F6 Triticum aestivum Traes_2AL_8EE7F34F6 N 0.945
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I 0.899
Traes_7DL_DF64397D7 Triticum aestivum Traes_7DL_DF64397D7 N 0.953
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I 0.899
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I 0.899
Traes_2DL_607AD3522 Triticum aestivum Traes_2DL_607AD3522 N 0.945
Traes_2BL_0AED4E377 Triticum aestivum Traes_2BL_0AED4E377 N 0.945
Traes_2AL_F001B4F26 Triticum aestivum Traes_2AL_F001B4F26 N 0.947
Traes_2AL_CB84F42D2 Triticum aestivum Traes_2AL_CB84F42D2 N 0.950
Traes_2AL_C0670BBDD Triticum aestivum Traes_2AL_C0670BBDD N 0.943
Traes_2BL_CBFB7D720 Triticum aestivum Traes_2BL_CBFB7D720 N 0.942
TRIUR3_24878 Triticum urartu TRIUR3_24878 N 0.945
TRIUR3_24879 Triticum urartu TRIUR3_24879 N 0.875
TRIUR3_10971 Triticum urartu TRIUR3_10971 N 0.923
TRIUR3_10969 Triticum urartu TRIUR3_10969 N 0.941
TRIUR3_08851 Triticum urartu TRIUR3_08851 I 0.899
TRIUR3_06372 Triticum urartu TRIUR3_06372 N 0.925
GRMZM2G440219 Zea mays GRMZM2G440219 I 0.889
GRMZM2G041668 Zea mays GRMZM2G041668 I 0.889
GRMZM2G048826 Zea mays GRMZM2G048826 N 0.962
GRMZM2G052239 Zea mays GRMZM2G052239 I 0.919
GRMZM2G178998 Zea mays GRMZM2G178998 I 0.877
GRMZM2G354151 Zea mays GRMZM2G354151 I 0.872
AC212859.3_FG008 Zea mays AC212859.3_FG008 N 0.941