CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si005790m.g
(
Setaria italica
)
NFX
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01422 (zf-NF-X1)
IPR000967
Si005790m.g
T300799_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si005790m
NFX
117
134
CPHVCVLQCHPGPCPPCK
Si005790m
NFX
162
190
CGRPCERMLPCRRHRCEKVCHTGPCGDCA
Si005790m
NFX
236
254
CGNHVCKDMCHPGPCGECE
Si005790m
NFX
294
312
CGVHRCKVNCHEGECPPCL
Si005790m
NFX
389
407
CGQHACQLLCHSGHCPPCL
Si005790m
NFX
446
463
CGHPASHSCHFGDCPPCV
Si005790m
NFX
499
517
CGIHACNRACHPAPCDQPP
Si005790m
NFX
532
563
CGQVCGAARRECKHTCTAPCHPSSQCPDLRCE
Links
Other
NFX
family TFs
Other
Setaria italica
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr2.LjT01H08.70.nc
Lotus japonicus
chr2.LjT01H08.70.nc
N
0.715
GSMUA_Achr7G12440_001
Musa acuminata
GSMUA_Achr7G12440_001
N
0.764
OBART06G09580
Oryza barthii
OBART06G09580
N
0.703
ORGLA06G0090600
Oryza glaberrima
ORGLA06G0090600
N
0.703
OGLUM06G10380
Oryza glumaepatula
OGLUM06G10380
N
0.703
ONIVA06G11110
Oryza nivara
ONIVA06G11110
N
0.703
OPUNC06G09140
Oryza punctata
OPUNC06G09140
N
0.703
ORUFI06G09920
Oryza rufipogon
ORUFI06G09920
N
0.703
GRMZM2G307823
Zea mays
GRMZM2G307823
N
0.845
GRMZM2G409627
Zea mays
GRMZM2G409627
N
0.845